Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq143 91.5 6e-13 >seq143 Length=17147 Score = 91.5 bits (100), Expect = 6e-13 Identities = 188/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 12766 CTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTACTATACCTAGGGTCTT 12825 ||| || ||||| |||| ||| || ||||||| ||||||||| || ||||| ||| |||| Sbjct 15975 CTCGGCAAGGACGGAGAGCTGCGATCCAATGTGACCATAACCAACGATACCAAGGATCTT 15916 Query 12826 TCCTCTAACTTCACGGCAACCTTGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGT-TCTT 12884 |||| || || ||| || | || ||||||||| | || | | | | || | Sbjct 15915 GCCTCGCACCTCGTAGCAGCCCTTGGAGACCTTGTTCCAGGTTCCA-GATCTCATCTCGT 15857 Query 12885 TGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCA 12944 || || || || | |||||| ||||| | || | | ||| |||| |||||| || | Sbjct 15856 TGACTCGGTCGCCCAGCTGACGCGAAAGGCTGATCATCTCTCCAATGACGAGCTCGGCAA 15797 Query 12945 CGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGT 13004 || || | ||| |||||||| |||||||| || | || |||| ||| | Sbjct 15796 CGGATCGTGAATTGGCGAAGGGAGAGTTAAAGACGGCTACACCGGCCTTGGCAGCAGCTT 15737 Query 13005 CTAGATTAACCTGATCGTAACCAATGCAGAAGCATCC 13041 | || | ||||| | | || ||||||||||| || Sbjct 15736 CGAGGTCGACCTGGTTGGTGCCGATGCAGAAGCAGCC 15700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884743141565276