Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20]
13,661 sequences; 24,230,715 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1070 289 5e-76
>seq1070
Length=636
Score = 289 bits (320), Expect = 5e-76
Identities = 220/257 (86%), Gaps = 2/257 (1%)
Strand=Plus/Minus
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120
||| |||||||| ||||||||||||||||||||||||||||||||||| | | | |||||
Sbjct 498 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 439
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 438 ATATTAGCATGGAATAACAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAACTG 379
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||| ||||| || |||||| | |||||| | |||||||||||||
Sbjct 378 CCGTAATGATTAAAAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 319
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||| |||||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 318 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 259
Query 301 GTGAACGAAAGTTAGGG 317
||||||| |||||||
Sbjct 258 -AGAACGAAGGTTAGGG 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915074974528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |