Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2122 107 5e-21 >seq2122 Length=394 Score = 107 bits (118), Expect = 5e-21 Identities = 150/207 (72%), Gaps = 15/207 (7%) Strand=Plus/Plus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-----CAACAAAGTGGG 249 ||| ||| ||||||||||||||| ||||||||||| |||| | | ||| Sbjct 176 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTTTTACTAAAAA----- 230 Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTC 308 || | ||||||| || | ||| |||||| ||||||||||| | ||| | | | Sbjct 231 CTTCAACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TAC 287 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 ||||| |||||| |||||| |||| | |||||||| | | || || ||||||||| Sbjct 288 TTTTCACCTTTCACTCACGTTACTC-TCCACTATCGCTAGATATGTTATACTTAGCCTTG 346 Query 369 GAGGATGGTCCCCCCATATTCAGACAA 395 ||||||||| ||||| |||||| |||| Sbjct 347 GAGGATGGTACCCCCTTATTCATACAA 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241430385024