Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20xerochloae_20[genbank_20GCA_5F001736075.1_202016-09-20] 13,661 sequences; 24,230,715 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1061 307 2e-81 >seq1061 Length=642 Score = 307 bits (340), Expect = 2e-81 Identities = 259/315 (82%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCC---GGCTTC 75 || ||||||||| ||||||||||||| | || | ||| | || | | | |||| Sbjct 158 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACATTTTGTTGGCCCCTTATGTCTTC 217 Query 76 TTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 |||||||||| |||| | || || |||||| | |||||||||||||||||||||| Sbjct 218 TTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGATG 277 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 ||||||||||||| |||| ||||||||||||||||||||||| |||||||| | ||| Sbjct 278 CCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTGCCCCT 337 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 || ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| || Sbjct 338 TGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGTAA 397 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 || ||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||| Sbjct 398 TTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTACG 457 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 458 TCCCTGCCCTTTGTA 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947070603008