Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vanrija_20humicola_20[genbank_20GCA_5F001600235.1_202016-03-01] 10 sequences; 22,653,840 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 289 2e-73 seq1 183 2e-41 >seq6 Length=2565775 Score = 289 bits (320), Expect = 2e-73 Identities = 627/929 (67%), Gaps = 12/929 (1%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || ||||| ||||||||||||||||| | ||| || || || | ||||||| Sbjct 1606626 GGGAGAGCGAGAGACGCGAGGTTGCAGACAGCGACCTCATCGGGGGCAGAGTACTCGATG 1606685 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || | | |||||||| | | ||| || || |||||| Sbjct 1606686 ATCTCAGTGCAGAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 1606745 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||| || |||||||| | |||| |||| || ||||| || | ||||| ||| Sbjct 1606746 TTGGCAGCGTCCTTGTAGAGCATGAACGGGCCACCAGTCTCGGTCTGAGCCTCAAGGATA 1606805 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATG 66240 ||| ||| || | ||||| | || | | | |||| || | || ||||| | Sbjct 1606806 GCGAACCAGAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTGCCCTCACGCTCGTACTT 1606864 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCAT--ACTTCGGACAGACATGGACACTTGTGT 66298 ||||| || | ||||| ||| || | || |||| || | || |||| | Sbjct 1606865 CTCGTACAGCTCCTCGAAC--TTCTCCGAGTGGACGTCGGCAAGGCCGGGGCACTCGGCA 1606922 Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || ||||| || | ||| || || ||||| || ||||| ||| || || || || ||| Sbjct 1606923 GGGCACATGAGGGTCCACTCGCCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 1606982 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 ||||||||||||||||| || || || || |||||| ||||||| || || | || | Sbjct 1606983 CAGAGGGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 1607042 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 |||||||| || || | ||||| ||||| || || ||||||||||| || | || | Sbjct 1607043 TCGAGGAAGTCGAACACATCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGA 1607102 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| |||||| ||||||||||| ||||| || | | | || | ||| || Sbjct 1607103 CGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGGCGTCGTACGCGCGGAGCATGGGG 1607162 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 |||| ||||| || | ||| ||||||||| | ||| || || || || || | | Sbjct 1607163 ACGATGCCGTTCGAGTAGCCGTTGGTGCCGGCAATGTACGAGCCCTTGGCACGAATGTTG 1607222 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGA--TGGCAGCACAATCGGCCACTG 66656 || | | ||||| ||||||||||| ||||| |||| ||| ||| | || Sbjct 1607223 TGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGGGTG 1607282 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 || | | ||||||||||| ||||| |||| |||| | |||| |||| || | | Sbjct 1607283 TC--GTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCACGACGACATCT 1607340 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 ||| | ||| || | | ||||||||| || | ||||| || ||||| | | Sbjct 1607341 GGGCGTGGGGGGTACCCGAGTTGAAGAGGGTAGGAGACGCGTGGGTGAAGTAGCGCTCCG 1607400 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCA 66835 ||||| ||||| ||||||| ||| |||||||| ||||| || || |||| | || Sbjct 1607401 ACATGAGGTTGTAGGTCTCGAGGACCTTCTCAATGTTGTCGCCGTGGATACCGACGGCCA 1607460 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAG 66895 || ||||| || | || || || || ||| | | | | ||||| | | | ||| Sbjct 1607461 CA-CGCATGAGCATGTGCTGGGGGCGCTCGGCGACCTTGCCGTTGATCTTGAGGAGGTAC 1607519 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 || || || |||||||||| |||||||| Sbjct 1607520 GAACGCTCAAGGGTCTTGAAGCCAAAGTA 1607548 >seq1 Length=5192464 Score = 183 bits (202), Expect = 2e-41 Identities = 470/701 (67%), Gaps = 21/701 (3%) Strand=Plus/Plus Query 61228 TCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTGTC 61286 |||||||| || ||||| ||||| | | || || ||| || | | |||| || ||| Sbjct 4742292 TCGGACGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCTGCTCCG-AGGTCCA-GTGCA 4742349 Query 61287 -GGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 |||||| ||||||||||||||||| |||||||| ||||||| |||| | Sbjct 4742350 TGGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 4742409 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAG--CGGGCGGAACGTGAACGATTGTTCAA 61403 || |||||||||| ||||||||| | || || || || | || | ||| | Sbjct 4742410 ACTCGCTTCTCATCGACACGTACATCCGCGACAACGCCCGCCGCGAGTACC--TCTTCCA 4742467 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463 ||||| || || || || | ||| ||| || || |||||| || | |||||||| Sbjct 4742468 GGCCATTGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTCCACTGGATCAC 4742527 Query 61464 CAGTACAACGGCTA--CATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521 | |||| ||| | || | ||| || || | || || || | |||||||| | Sbjct 4742528 --GGACAAGCGCTCGTCGTTCGCTGAGCGTCTGATTGCTTTCGCTGCCGTCGAGGGCATC 4742585 Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581 || ||| || ||||||||| | ||||| ||| | ||||| ||||| || ||||||||| Sbjct 4742586 TTCTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGT 4742645 Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641 || |||||| ||| ||| | || || || |||||||| | || || ||||| Sbjct 4742646 CTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGC 4742705 Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 | || |||| | | || | | || || || | | |||| | Sbjct 4742706 CTCCTCTTCACCCAC-CTCCGCCG--CCGCCCTCACCCCGACACCATTGCCAAGATCATC 4742762 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 ||||| || | ||||| ||||| || || || || || | |||||||| |||||| Sbjct 4742763 AAGGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATC 4742822 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | ||| Sbjct 4742823 GGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGCCTGCTCGTC 4742882 Query 61822 G-ATTTGGGTATG--AAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATG 61878 | |||| | | |||| |||| || ||| ||||| || || |||||||| ||| Sbjct 4742883 GCCCTTGGCAACGACAAGC---TCTACAACTCGACCAACCCCTTCGACTTCATGGAGATG 4742939 Query 61879 ATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 || ||||| | |||||| | || || |||||| ||||| Sbjct 4742940 ATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 4742980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567951546400