Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq78 286 5e-75 seq249 127 3e-27 >seq78 Length=718 Score = 286 bits (316), Expect = 5e-75 Identities = 203/229 (89%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 214 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 271 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 272 CTCGTTGAAGAGCAAGAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 331 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 332 ACCCAGACCTTTCGGCCAAGGAAAGAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 391 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 440 >seq249 Length=367 Score = 127 bits (140), Expect = 3e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 144 TAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 203 |||||||| || | | |||||||||||||||||||||||||||| |||||||||||||| Sbjct 363 TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCAC 304 Query 204 AGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||| Sbjct 303 AGACCTGTTATTGCCTCAAACTTCC 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998062190