Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq212 495 2e-137 seq191 464 3e-128 seq176 214 7e-53 >seq212 Length=1413 Score = 495 bits (548), Expect = 2e-137 Identities = 500/650 (77%), Gaps = 54/650 (8%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||||||||||||||||||||||||||||||| || |||| |||||||| | ||||| || Sbjct 638 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAATTCCATCTAAGGC 579 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 578 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 519 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | | Sbjct 518 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCAT 459 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGC--GGT----CAGGCC 268 || || |||| | || ||| || || ||| | | ||| |||| | Sbjct 458 GCGTGCTCGGACTCAGCTGGGT--TCGTCC----CAGTCTATTTCCGGGTGCCGCAGGTC 405 Query 269 AGCATCAGCT-CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 |||||||| | |||||||| ||| || || | ||||| ||||| | || || |||| Sbjct 404 AGCATCAGTTTCGGGCGGT-GGAAAACGGGCGGGGGAAGGTGGCATC--TCCGGATGTGT 348 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG---------------- 371 |||||||| | | | |||| | || ||||||||| ||| Sbjct 347 TATAGCCCCCGTTTGGATGCATCGCGTG-GGACTGAGGAACGCAGCGCGCCTCTTTACGG 289 Query 372 -------CTCCGGC------------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 |||||| |||||||||||| |||||| | ||| || ||||| Sbjct 288 GGTCGGTCTCCGGACACGAACGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGT 229 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||||||| | ||||||| |||||||| |||||||| | Sbjct 228 CTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTATTTGGGTGGCAAACCCGAGT 169 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGAT 532 ||| ||||||||| || | |||||||| || | || |||||||||||||||| ||| Sbjct 168 GCGGAATGAAAGTAAATGCAGGTGGGATCCGC--AAGGAGCACCATCGACCGATCTGGAT 111 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 | || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 110 CTTTTGTGATGGATTTGAGTAAGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATG 51 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||| |||||||||||||||||||||||||||||| |||| || Sbjct 50 CCTGAATAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATT 1 >seq191 Length=1926 Score = 464 bits (514), Expect = 3e-128 Identities = 439/550 (80%), Gaps = 15/550 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 1133 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 1074 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 1073 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 1014 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 1013 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 954 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 953 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 897 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 896 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 838 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 837 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 780 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 779 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 720 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG- 494 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| Sbjct 719 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 660 Query 495 TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 |||| | || || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 659 TGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 600 Query 554 AGAGCATAGC 563 |||||||||| Sbjct 599 AGAGCATAGC 590 Score = 260 bits (288), Expect = 6e-67 Identities = 161/172 (94%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 |||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct 579 GCACCATCGACCGATCTGGATCTTTTGTGATGGATTTGAGTAAGAGCATATATGTTGGGA 520 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 460 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 459 TCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 408 >seq176 Length=1149 Score = 214 bits (236), Expect = 7e-53 Identities = 127/133 (95%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 GTAAGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCC 60 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| Sbjct 61 AGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTG 120 Query 671 GGTATAGGGGCGA 683 ||||||||||||| Sbjct 121 GGTATAGGGGCGA 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079994294300