Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq72 172 7e-41 seq89 143 3e-32 >seq72 Length=487 Score = 172 bits (190), Expect = 7e-41 Identities = 136/161 (84%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 172 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 113 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| || |||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct 112 GGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCC-CCGCC 54 Query 126 CACCAATG---AAGGCATACGGGCTCACCAAGAGGTAGGGC 163 | | | | | | | |||||||||||||||| ||| Sbjct 53 CGGCCGCGTAAACGACCGAACGGCTCACCAAGAGGTAAGGC 13 >seq89 Length=614 Score = 143 bits (158), Expect = 3e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 317 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 376 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || || |||||||||||||||||||||||| |||| |||||||||| ||||| Sbjct 377 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGTTC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198466244