Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001007165.2_20201 5-05-09] 266 sequences; 19,519,467 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq181 554 1e-155 seq192 544 2e-152 seq67 122 3e-25 >seq181 Length=2656 Score = 554 bits (614), Expect = 1e-155 Identities = 357/384 (93%), Gaps = 6/384 (2%) Strand=Plus/Plus Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1 AGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCC 60 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 61 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAG 120 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| ||||| Sbjct 121 GCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGATTTTT 178 Query 305 TATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAA 362 ||||||||||||||| | ||||| || |||| | |||| |||||||||||||||||||| Sbjct 179 TATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAA 238 Query 363 TTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 239 TTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTAATGA 298 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 299 GCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 358 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 359 AGACAAGCATATGACTACTGGCAG 382 >seq192 Length=394 Score = 544 bits (602), Expect = 2e-152 Identities = 354/384 (92%), Gaps = 4/384 (1%) Strand=Plus/Plus Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1 AGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCC 60 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||| Sbjct 61 TCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGTCGGCGCAAG 120 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAA-GGAGCCCCGAAGGGCGTTGGTTTT 303 ||||| ||||||| |||||||||||||||||||| ||||| | ||||||||||| Sbjct 121 GCCATACGATTCGAAAAGTTATTATGAATCACCAAGGGAGCGCTTTCACGCGTTGGTTTT 180 Query 304 TTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGA 361 |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct 181 TTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTAGGCATGTATTAGCTCTAGA 240 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 |||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct 241 ATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAATGAG 300 Query 422 CCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 |||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||| Sbjct 301 CCATTCGCAGTTTCACAGTATGAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTG 360 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 361 AGACAAGCATATGACTACTGGCAG 384 >seq67 Length=1136 Score = 122 bits (134), Expect = 3e-25 Identities = 77/82 (94%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 424 ATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482 |||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||| Sbjct 1 ATTCGCAGTTTCACAGTATGAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAG 60 Query 483 ACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| Sbjct 61 ACAAGCATATGACTACTGGCAG 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395982336