Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq990 78.8 1e-12 seq623 78.8 1e-12 seq429 78.8 1e-12 >seq990 Length=4511 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||||| |||||||||||||| |||| | |||||||||||||||||||| |||| Sbjct 398 CAGTGTAGCCCGCGTGCGGCCCAGGGCATCGAGGGGCATCACAGACCTGTTATCGCCT 455 >seq623 Length=900 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||||| |||||||||||||| |||| | |||||||||||||||||||| |||| Sbjct 267 CAGTGTAGCCCGCGTGCGGCCCAGGGCATCGAGGGGCATCACAGACCTGTTATCGCCT 324 >seq429 Length=1183 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||||| |||||||||||||| |||| | |||||||||||||||||||| |||| Sbjct 550 CAGTGTAGCCCGCGTGCGGCCCAGGGCATCGAGGGGCATCACAGACCTGTTATCGCCT 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987418805