Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq317 275 2e-71 >seq317 Length=10481 Score = 275 bits (304), Expect = 2e-71 Identities = 210/247 (85%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| Sbjct 8510 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGGATCCGCCAGGCCCGTTCCCCTGGCTG 8569 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 ||||||||| | | ||||||||||||||||||||| | |||||||||||| |||| Sbjct 8570 TGGTTTCGCCGGGCTGCGCATAGGGACAGTGGGAATCTCGCTGATCCATTCATGCACGTC 8629 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8630 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 8689 Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||| || | | || | | ||||| | | ||||||||||||| |||| | Sbjct 8690 ACCCGTGCGTCCGCGGGGCTCCCCGCCTTGAC-TCCCCGGCACTGGGCAGAACTCACGTC 8748 Query 525 GCGTCAA 531 ||||||| Sbjct 8749 GCGTCAA 8755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635171760096