Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8054 233 6e-59 seq1993 233 6e-59 seq7202 228 3e-57 seq7374 224 3e-56 seq5290 224 3e-56 >seq8054 Length=6264 Score = 233 bits (258), Expect = 6e-59 Identities = 149/161 (93%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 4456 ACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGCTGTTCTTTCCAAGCCCGTTCCCTT 4397 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||| Sbjct 4396 GGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGTTGATCCATTCATGC 4338 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 ||||||||||||||||||||||||||||||||||||||||| Sbjct 4337 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 4297 >seq1993 Length=3966 Score = 233 bits (258), Expect = 6e-59 Identities = 149/161 (93%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 602 ACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGCTGTTCTTTCCAAGCCCGTTCCCTT 661 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||| Sbjct 662 GGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGTTGATCCATTCATGC 720 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 ||||||||||||||||||||||||||||||||||||||||| Sbjct 721 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 761 >seq7202 Length=5500 Score = 228 bits (252), Expect = 3e-57 Identities = 148/161 (92%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 702 ACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGCTGTTCTTTCCAAGCCCGTTCCCTT 761 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||| Sbjct 762 GGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGTTGATCCATTCATGC 820 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 ||||||||| ||||||||||||||||||||||||||||||| Sbjct 821 GCGTCACTACTTAGATGACGAGGCATTTGGCTACCTTAAGA 861 >seq7374 Length=4409 Score = 224 bits (248), Expect = 3e-56 Identities = 147/161 (91%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 2429 ACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGCTGTTCTTTCCAAGCCCGTTCCCTT 2370 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||| Sbjct 2369 GGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGTTGATCCATTCATGC 2311 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 ||||||||||||| |||||||||||||||||||||||| || Sbjct 2310 GCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAGGA 2270 >seq5290 Length=3242 Score = 224 bits (248), Expect = 3e-56 Identities = 147/161 (91%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 3132 ACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGCTGTTCTTTCCAAGCCCGTTCCCTT 3073 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||| Sbjct 3072 GGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGTTGATCCATTCATGC 3014 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 ||||||||||||| |||||||||||||||||||||||| || Sbjct 3013 GCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAGGA 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635062201696