Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq118 257 7e-66 >seq118 Length=5470 Score = 257 bits (284), Expect = 7e-66 Identities = 251/324 (77%), Gaps = 36/324 (11%) Strand=Plus/Plus Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 || |||||| ||| || ||||||||| |||||||||||||||||||| || |||||||| Sbjct 733 CGAAATGGTCTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCAACTATGCGA 792 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC-----GGAGG-----TGGGA 499 || |||| ||||||||| || |||||| |||| |||| ||| | ||||| Sbjct 793 GTATTTGAGTGTCAAACTCGGATGCGTAAAGAAACTGAATTCGTGGGATGGCAAATGGGA 852 Query 500 A-----------------CCCGTGAGGGTGCACCATCGACCGATCCT-GA--TGTCTTCG 539 ||| || | |||||||| | || |||| || |||||| Sbjct 853 TTGTTGTTTTGCAGCGATCCCATGTGCTTGCACCATGGGCCAGTCCTCGACTTGTCTT-- 910 Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 ||||| | | ||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 911 ---GGATT-GCGCTGGAGCATAAGTGTTAGGACCCGAAAGATGGTGAACTATGCCTGAAT 966 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 967 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 1026 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||| Sbjct 1027 CGTCAAATTTGGGTATAGGGGCGA 1050 Score = 192 bits (212), Expect = 2e-46 Identities = 145/171 (85%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| |||||||||||| ||||||||| |||| ||| | ||||||||||||| Sbjct 319 GAGTCGGATTGCTTGGGAATGCAGTCCTAAATGGGTGGTACATTCCATCTAAAGCTAAAT 378 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 379 ATAGGCAAGAGACCGATAGCATACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 438 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 ||||||||||| || ||||||||||||| |||||||| || ||| ||||| Sbjct 439 AGAGAGTTAAACAGTACGTGAAATTGTTAAAAGGGAAACGATTGAGACCAG 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079986872600