Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq175 288 2e-75 >seq175 Length=2624 Score = 288 bits (318), Expect = 2e-75 Identities = 236/289 (82%), Gaps = 35/289 (12%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 668 ACTCGTTGCCTTTATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 727 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA---ATAGTCCCTCTAAGAAGCCA 118 |||||||||||||||||||||||| ||| || || ||||||||||||||||| || Sbjct 728 CCTGTTATTGCCTCAAACTTCCAT---CTGTTAGTCACAGATAGTCCCTCTAAGAAGTCA 784 Query 119 GC-CACCAACCAT----------AG-----------TCGATGG-------GGCTATTTAG 149 | |||| ||| || ||| ||| | ||| |||| Sbjct 785 TCGCACCGGGCATGTTTCAGCCCAGATGGCAAACCATCGCTGGTTAGCCTGACTAGTTAG 844 Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 845 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 904 Query 210 CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 905 CGGCCATGCACCACCACCCATAGAATCATGAAAGAGCTCTCAATCTGTC 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796795275972