Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq118 396 5e-108 >seq118 Length=5470 Score = 396 bits (438), Expect = 5e-108 Identities = 246/264 (93%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 3217 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 3158 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 3157 TTAGTGGGTGAACAATCCAACGCTTTGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGA 3098 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3097 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 3038 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||||| | ||| ||| |||||||||||||||| Sbjct 3037 CTGTGGTAACTTTTCTGACACCTCTAGCCTTACATTCAAAGGATCTAAAGGATCGATAGG 2978 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||| |||||||||||| Sbjct 2977 CCACGATTTCTCGGTTTGTATTCA 2954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854394771072