Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq118 632 7e-179 >seq118 Length=5470 Score = 632 bits (700), Expect = 7e-179 Identities = 475/553 (86%), Gaps = 19/553 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||| ||||||||| Sbjct 2921 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACATCTGCGTTATT 2862 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| Sbjct 2861 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTGAACCTTGATC 2802 Query 127 GGCCCGCGAAG-------GACCTTAACGC----CAGAA-AATGGTCGGTGAAGACCAGTT 174 || || | | ||| | | |||| ||| || | | | | Sbjct 2801 AACCGGCAACAATGCGCCGGTCTTGATCCATAACAGACTAATACCAGGGGTATAGTCTCT 2742 Query 175 CCGCTTCA-TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC---- 229 | | || || | |||||||||||||||||| ||||||||||||||| | |||| Sbjct 2741 TCAATACAATTCAATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCATTGTCGCCCCTT 2682 Query 230 GAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTC 288 | ||||||||||||| ||||||| ||| | ||| ||||||||||||||||||||||| Sbjct 2681 GCGGTGGCTCCCACTTATGCTACACC-CTCTATGTCTTTTCACAAAGTCGGACTAGAGTC 2623 Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2622 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGT 2563 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2562 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 2503 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2502 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 2443 Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2442 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 2383 Query 529 CAACATCACTTTC 541 ||||| | |||| Sbjct 2382 CAACACCTTTTTC 2370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635189992576