Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 179 3e-40 >seq4 Length=66353 Score = 179 bits (198), Expect = 3e-40 Identities = 389/571 (68%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 61076 AGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGG 61135 |||| | || || ||| |||||||||||| || | ||| |||||||| | || | Sbjct 58976 AGTACTACGACATCTGGAACATGTACAAAAACGCAGTGGCTAGTTTCTGGACCGCAGAAG 59035 Query 61136 AGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC-GTTTATCGAGCGGTGAACAACAT 61194 | ||||| | | ||||||| |||||||||| | ||| || | ||| ||| Sbjct 59036 AAGTCGACCTTGGAAGAGACATGGCTGACTGGGAGAAGCTTAACGC-CAACGAAAGACAC 59094 Query 61195 TTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254 |||||| | || | || ||||||||||| || ||||| || || ||||| || | Sbjct 59095 TTCATTTCCTACGTCCTCGCCTTCTTTGCCGCCTCTGACGGAATTGTTAATGAAAACCTG 59154 Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314 | ||| | || || ||||||||| | || || || || ||||||||||||||| Sbjct 59155 GTTGAAAGGTTTGCCTCTGAGGTGCAAATCAGTGAAGCTCGATGCTTCTACGGCTTCCAG 59214 Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGG 61374 ||| || ||||| ||||| | ||||||||| | ||||| || |||||||||| Sbjct 59215 ATTATGATTGAGAACATCCACGCTGAGATGTACTCCCTACTCATTGACACGTACATCA-A 59273 Query 61375 GAGC--GGGCGGAACGTGAAC--GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAA 61430 |||| | ||| || | || ||||| |||||||| |||| || |||| | || Sbjct 59274 GAGCCAGAGCGAAAAG---ACTTTCTTGTTTAATGCCATTGAGAACATCCCGGTCATAAA 59330 Query 61431 GCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAAC 61489 ||| || || ||||| | ||||| | ||| | | | ||| | |||| || | Sbjct 59331 AAAGAAGGCAGACTGGGCGCTGCGGTGGAT-ATCAGATGCTAAGGCCAGCTTTGCAGAGC 59389 Query 61490 GATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCT 61549 | | |||| ||||| || || || | || ||| || || ||||| || |||| Sbjct 59390 GGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCTTCTCCGGGTCATTTGCAGCTATCT 59449 Query 61550 TTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA- 61608 | ||| | |||||||| ||||||||||| || || |||||| || ||| | ||||| Sbjct 59450 TCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAACCTTCTCTAACGAGCT--TATCAG 59507 Query 61609 -CGCGACGAGGGCATGCATTGTGATTTTGCT 61638 || ||||| ||| | ||||| || |||||| Sbjct 59508 CCGAGACGAAGGCCTTCATTGCGACTTTGCT 59538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567796494880