Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq147 259 8e-67 seq145 259 8e-67 seq142 259 8e-67 >seq147 Length=6404 Score = 259 bits (286), Expect = 8e-67 Identities = 176/198 (89%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | Sbjct 5582 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGG 5523 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 |||||||||||||| |||||| || || ||| || | ||||||||||||||||| Sbjct 5522 TGGGTGAACAATCCCACGCTTTGCGCCTTGTGCAGCGCAGCGCTAGGAAGAGCCGACATC 5463 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| Sbjct 5462 GAAGGATCAAAAAGCGGCGTCGCTGTGGACGCTTGGCCGCCACAAGCCAGTTATCCCTGT 5403 Query 215 GGTAACTTTTCTGGCACC 232 ||||||||||| |||||| Sbjct 5402 GGTAACTTTTCCGGCACC 5385 >seq145 Length=6640 Score = 259 bits (286), Expect = 8e-67 Identities = 176/198 (89%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | Sbjct 1059 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGG 1118 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 |||||||||||||| |||||| || || ||| || | ||||||||||||||||| Sbjct 1119 TGGGTGAACAATCCCACGCTTTGCGCCTTGTGCAGCGCAGCGCTAGGAAGAGCCGACATC 1178 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| Sbjct 1179 GAAGGATCAAAAAGCGGCGTCGCTGTGGACGCTTGGCCGCCACAAGCCAGTTATCCCTGT 1238 Query 215 GGTAACTTTTCTGGCACC 232 ||||||||||| |||||| Sbjct 1239 GGTAACTTTTCCGGCACC 1256 >seq142 Length=6948 Score = 259 bits (286), Expect = 8e-67 Identities = 176/198 (89%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | Sbjct 5582 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGG 5523 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 |||||||||||||| |||||| || || ||| || | ||||||||||||||||| Sbjct 5522 TGGGTGAACAATCCCACGCTTTGCGCCTTGTGCAGCGCAGCGCTAGGAAGAGCCGACATC 5463 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| Sbjct 5462 GAAGGATCAAAAAGCGGCGTCGCTGTGGACGCTTGGCCGCCACAAGCCAGTTATCCCTGT 5403 Query 215 GGTAACTTTTCTGGCACC 232 ||||||||||| |||||| Sbjct 5402 GGTAACTTTTCCGGCACC 5385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398410816