Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nosema_20ceranae_20[genbank_20GCA_5F000988165.1_202015-05-05] 536 sequences; 5,690,748 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq79 215 9e-54 >seq79 Length=65341 Score = 215 bits (238), Expect = 9e-54 Identities = 166/194 (86%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct 64790 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCATCTCACGTTCCTCATTAC 64731 Query 95 TGGGTGAACAATCCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||| ||| | | || | || || ||||| |||||| |||| Sbjct 64730 CGGGTGAACAATCCAACACTTCGTAACATATACA-CTACG--ATGATCAGAAGAGACGAC 64674 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||| ||||||||||| |||||||||| |||||| |||| |||||||||||||||| Sbjct 64673 ATCGAAGAATCAAAAAGCAGAGTCGCTATGATCGCTTGCCTGCTACAAGCCAGTTATCCC 64614 Query 212 TGTGGTAACTTTTC 225 |||||||||||||| Sbjct 64613 TGTGGTAACTTTTC 64600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395420416