Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1443 246 1e-62 >seq1443 Length=4215 Score = 246 bits (272), Expect = 1e-62 Identities = 201/243 (83%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct 3460 ACTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTCTCTAACTCAAGCCCGTTCCCTT 3401 Query 340 G-GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 | || |||| ||| |||| | |||||||||||||||||||||||| | |||||||||| Sbjct 3400 GAGCCGTGGGTTCACTAGTCTGCAGATAGGGACAGTGGGAATCTCGTCATTCCATTCATG 3341 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3340 CGCGTCGACATTTAATCGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 3281 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||| | |||||| |||| || | |||||| |||||||| | Sbjct 3280 CCGTTTACCCGCGCGTACAGTCATTTCTCACCTTTCACTGTTCGAGCACCGGGCAGAACT 3221 Query 519 CAC 521 ||| Sbjct 3220 CAC 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635173787744