Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq495 102 6e-17
>seq495
Length=2372
Score = 102 bits (112), Expect = 6e-17
Identities = 291/445 (65%), Gaps = 7/445 (2%)
Strand=Plus/Minus
Query 61490 GATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCT 61549
||||| | |||||||| || || ||| | |||||| || ||||| | ||||
Sbjct 719 GATTGATAGCATTTGCATGTGTAGAAGGTCTTTTTTTCTCCTCTTCCTTTGCATCCATCT 660
Query 61550 TTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCAC 61609
| ||||| |||||| | || ||||| |||||||| || |||||| | |||||||
Sbjct 659 TCTGGTTAAAGAAAAGAGGCAAGATGCCTGGTCTGACATTTTCAAATGAGCTCATATCAC 600
Query 61610 GCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATC 61669
| || |||||| | |||| | ||||| ||||| || | | ||||| |||
Sbjct 599 GAGATGAGGGCTTACATTACAAATTTGCCGTTTTAATACACTCA---TATCTTAAAAATA 543
Query 61670 --GTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGA 61727
|| | | ||| || | ||||| || || ||| || || ||||
Sbjct 542 AGGTAAATA--AAGAGATAGTCAAACAAATTGTGATGGAAGCAGTAGAAATAGAGAAGGA 485
Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787
||| | | || | ||||| |||||||| || || ||||||||| |||| |
Sbjct 484 GTTTGTTAATGTTTCATTGCCTGTCTCACTTATAGGTATGAATTGTAATTCCATGTGCAA 425
Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847
||| | ||||| || || || | | || ||||| | | || | |||||
Sbjct 424 ATATGTAGAATTCGTAGCAGATGGCATCTTACAAGATTTTGATTGTAAAAAAGTTTATAA 365
Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907
|||||| |||||||||||||||||||| | ||||| | | || || || || |||||
Sbjct 364 TACGAACAACCCATTTGATTTCATGGAAAATATTTCATTACAAGGTAAAACCAACTTTTT 305
Query 61908 CGAGAAACGTGTAGGCGACTATCAA 61932
|||||||||||| || ||||||
Sbjct 304 TGAGAAACGTGTATCTGAATATCAA 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397560232887920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |