Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq495 102 6e-17 >seq495 Length=2372 Score = 102 bits (112), Expect = 6e-17 Identities = 291/445 (65%), Gaps = 7/445 (2%) Strand=Plus/Minus Query 61490 GATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCT 61549 ||||| | |||||||| || || ||| | |||||| || ||||| | |||| Sbjct 719 GATTGATAGCATTTGCATGTGTAGAAGGTCTTTTTTTCTCCTCTTCCTTTGCATCCATCT 660 Query 61550 TTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCAC 61609 | ||||| |||||| | || ||||| |||||||| || |||||| | ||||||| Sbjct 659 TCTGGTTAAAGAAAAGAGGCAAGATGCCTGGTCTGACATTTTCAAATGAGCTCATATCAC 600 Query 61610 GCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATC 61669 | || |||||| | |||| | ||||| ||||| || | | ||||| ||| Sbjct 599 GAGATGAGGGCTTACATTACAAATTTGCCGTTTTAATACACTCA---TATCTTAAAAATA 543 Query 61670 --GTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGA 61727 || | | ||| || | ||||| || || ||| || || |||| Sbjct 542 AGGTAAATA--AAGAGATAGTCAAACAAATTGTGATGGAAGCAGTAGAAATAGAGAAGGA 485 Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787 ||| | | || | ||||| |||||||| || || ||||||||| |||| | Sbjct 484 GTTTGTTAATGTTTCATTGCCTGTCTCACTTATAGGTATGAATTGTAATTCCATGTGCAA 425 Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847 ||| | ||||| || || || | | || ||||| | | || | ||||| Sbjct 424 ATATGTAGAATTCGTAGCAGATGGCATCTTACAAGATTTTGATTGTAAAAAAGTTTATAA 365 Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 |||||| |||||||||||||||||||| | ||||| | | || || || || ||||| Sbjct 364 TACGAACAACCCATTTGATTTCATGGAAAATATTTCATTACAAGGTAAAACCAACTTTTT 305 Query 61908 CGAGAAACGTGTAGGCGACTATCAA 61932 |||||||||||| || |||||| Sbjct 304 TGAGAAACGTGTATCTGAATATCAA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560232887920