Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001888035.1_202016-12-01] 439 sequences; 5,850,007 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq23 248 3e-63 >seq23 Length=3841 Score = 248 bits (274), Expect = 3e-63 Identities = 203/243 (84%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG-CCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| Sbjct 758 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGG--CCGTCCAGGCCCGTTCCCC 815 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||| ||| |||||||| | ||||||||||||||||||||| | |||||||||| Sbjct 816 TGGAAATGGGTTCGCTAGTCTACATGTAGGGACAGTGGGAATCTCGTCATTCCATTCATG 875 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 876 CGCGTCACCATTTAAATGACGAGGCGTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 935 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| ||||| |||| | | ||||| || | | || | |||||| |||||||| | Sbjct 936 CCGTTAACCCGTGCTTTCTGGCATTTCCTCCGTGTCAC-GACCGAGCACCGGGCAGAACT 994 Query 519 CAC 521 ||| Sbjct 995 CAC 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635192821472