Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq249 262 1e-67 >seq249 Length=12283 Score = 262 bits (290), Expect = 1e-67 Identities = 207/244 (85%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| | Sbjct 8431 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACTGTGCCAGGCCCGTTCCCCT 8490 Query 340 GGCT-GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||||| Sbjct 8491 GGCCCGTGGTTTCGCTAGTCTGCAGATAGGGACAGTGGGAATCGCGTCATTCCATTCATG 8550 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8551 CGCGTCACCATTTAAGTGACGAGGCGTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 8610 Query 459 CCGTTTACCCGCGCTTGGTTGAATTT-CTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||||| ||||| |||| |||| | ||| ||| || | |||||| |||||||| Sbjct 8611 CCGTTAACCCGTGCTTACAGCTATTTCCGTCA-TTTCACTGTTCGAGCACCGGGCAGAAC 8669 Query 518 TCAC 521 |||| Sbjct 8670 TCAC 8673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194930880