Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq101 251 2e-64 >seq101 Length=4085 Score = 251 bits (278), Expect = 2e-64 Identities = 174/196 (89%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| | Sbjct 3336 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGACTGTGCCAGGCCCGTTCCCCT 3277 Query 340 GGCT-GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||| |||| |||||||| | |||||||||||||||||||| ||| | |||||||||| Sbjct 3276 GGCCCGTGGGTTCGCTAGTCTGCAGATAGGGACAGTGGGAATCGCGTCATTCCATTCATG 3217 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3216 CGCGTCACCATTTAAGTGACGAGGCGTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 3157 Query 459 CCGTTTACCCGCGCTT 474 ||||| ||||| |||| Sbjct 3156 CCGTTAACCCGTGCTT 3141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635193802592