Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5 304 1e-77
seq16 105 5e-18
seq1 105 5e-18
>seq5
Length=183138
Score = 304 bits (336), Expect = 1e-77
Identities = 581/843 (69%), Gaps = 25/843 (3%)
Strand=Plus/Plus
Query 61082 AGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCG 61141
||||| | |||| ||||||||| |||| | | || |||||||| ||||| || || |
Sbjct 59357 AGGATGTATGGCAGATGTACAAACAGGCATTATCATCATTCTGGACAGTGGAAGAAGTTG 59416
Query 61142 ATTTGTCCAAAGACATGAATGACTGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATT 61200
|| | || || || || |||| ||| | || || | || | | ||| | ||||| ||
Sbjct 59417 ATCTATCAAAGGATATTGATGATTGGAACCGGTTGAACG-GAGATGAGCGCCATTTTATA 59475
Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTG--G 61258
| ||| | || |||||||| || |||||||||||||| || |||||| | ||| |
Sbjct 59476 TCGTACGTGCTCGCATTCTTTGCTGCATCGGACGGTATCGTGAACGAGAATCTCTTGGAG 59535
Query 61259 AACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318
||| | |||||| |||||||| | |||||||| || || |||||||| ||||||
Sbjct 59536 AACTTCTCGCGC--GAGGTGCAGCTCAAAGAGGCGCGCTGCTTTTACGGCTTTCAGATTA 59593
Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|| ||||| || ||| || |||||| | || |||||||||||||| | ||| |
Sbjct 59594 TGATCGAGAACGTGCACAGTGAAATGTACTCGTTGCTGATCGATACGTACATTAAGGATC 59653
Query 61379 GGGCGGAACGTGAACGA----TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434
|| | | ||| || | |||||||| || | | || |||||||| |
Sbjct 59654 AGG----AAGAGAAGGACTTTCTTTTCAATGCGATTGCCAACATCAATACGGTGAAGAGA 59709
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
|| || || ||| ||| || ||||| | || | || |||| ||| |
Sbjct 59710 AAGGCTGAGTGGTGCTTTAAATGGATAAATGATAAAGATTCTGATTTTGCAACACGTGTT 59769
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| || |||||| || ||||| | || || ||||||||||| || | ||||| |||
Sbjct 59770 ATTGCGTTTGCGTGTGTTGAGGGGCTGTTCTTTAGTGGATCGTTCGCATCTATCTTCTGG 59829
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614
|||| ||||| || |||||||||||||| || ||| || |||||||||||||| |||
Sbjct 59830 CTGAAAAAACGCGGTCTTATGCCCGGTCTTACATTCTCTAACGAGTTGATATCACGTGAC 59889
Query 61615 GAGGGCATGCATTGTGATTTTGCTGTT-TTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672
|||||| |||||| | | ||||||||| || | ||||||| ||| || ||| | |
Sbjct 59890 GAGGGCCTGCATTATCAATTTGCTGTTCTTATGAACAAAACGCTCATC-GGCCAAT-GCC 59947
Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || || |||||||| ||||| || || ||| | || |||
Sbjct 59948 CAAAAGAAAAG---GTATTAGAGATTGTGAAGGAGGCAGTGGAAATTGAAGAAGAGTTTG 60004
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
| ||||| ||||||| || ||||| ||||| ||||| || | |||| ||||| |
Sbjct 60005 TCTCTGACTCTTTGCCTGTGTCACTGATCGGTATGAACTGCAAGTTGATGTGCCAGTACA 60064
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
||||||| ||||| || | | | || |||||||| || || | | || |||
Sbjct 60065 TTGAATTCGTTGCGGATGGAATACTTGTTGATTTGGGCATTGGACG--TGTGTACAACGT 60122
Query 61853 AA--AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGA 61910
|| || || |||||||||||||| | ||||||||| ||| ||||||||||| || ||
Sbjct 60123 AACGAATCCGTTTGATTTCATGGAGAATATTTCGCTGTTTGGGAAGACGAATTTCTTTGA 60182
Query 61911 GAA 61913
|||
Sbjct 60183 GAA 60185
>seq16
Length=116485
Score = 105 bits (116), Expect = 5e-18
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366
||||||||| | |||| | | || | ||||| || |||||||||||||| || ||
Sbjct 65310 CAGCGACCAGTTCTCATCGTTGTGCACCCTCCGCATGAACAGATCAGGTATCCACAGCGC 65369
Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT-GCCGTGATTTTTGCGCAAGTCGAGGA 66425
||| | ||||||||| || ||||||| | ||||| || ||||| | || ||||
Sbjct 65370 TGTGAAAATATCGCGTGCACGCAGCTCCTCTTTACCCGTG-TTCTTGCGTATATCAAGGA 65428
Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485
|||||||||| |||| ||||| || || | |||||| || | ||| ||| |||||
Sbjct 65429 ACTCAAAGATATCGGAGTGCCACGGCTCGACGTAGATCGCCATCGATCCCGGTCGTTTCT 65488
Query 66486 CGCCACCTTGGTCGACGTAGCG 66507
||| ||||| || | | ||||
Sbjct 65489 TGCCGCCTTGATCAATGCAGCG 65510
Score = 87.8 bits (96), Expect = 1e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 65695 CTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCG 65754
|||||| ||||| | |||||| | || ||||| ||||||| ||| || || || |||||
Sbjct 64716 CTCCTTCGCAAGCTCACAGCTCGCATCAAGTGCTGCAAAATGAATCGTTTCAAATATGCG 64775
Query 65755 TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTC 65814
||| | |||| ||||| | || |||||||| | || || |||||| ||
Sbjct 64776 CAAATTTACGGCACGCGCCTCCTTTGAATCATACGGCATCCTCAGCATCACAAAAACATC 64835
Query 65815 GGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850
|| || || || ||||||| ||||||||||||||
Sbjct 64836 AGCAAGGCCCTGCACTCCAAGGCCGATGGGACGATG 64871
>seq1
Length=243087
Score = 105 bits (116), Expect = 5e-18
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366
||||||||| | |||| | | || | ||||| || |||||||||||||| || ||
Sbjct 194780 CAGCGACCAGTTCTCATCGTTGTGCACCCTCCGCATGAACAGATCAGGTATCCACAGCGC 194839
Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT-GCCGTGATTTTTGCGCAAGTCGAGGA 66425
||| | ||||||||| || ||||||| | ||||| || ||||| | || ||||
Sbjct 194840 TGTGAAAATATCGCGTGCACGCAGCTCCTCTTTACCCGTG-TTCTTGCGTATATCAAGGA 194898
Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485
|||||||||| |||| ||||| || || | |||||| || | ||| ||| |||||
Sbjct 194899 ACTCAAAGATATCGGAGTGCCACGGCTCGACGTAGATCGCCATCGATCCCGGTCGTTTCT 194958
Query 66486 CGCCACCTTGGTCGACGTAGCG 66507
||| ||||| || | | ||||
Sbjct 194959 TGCCGCCTTGATCAATGCAGCG 194980
Score = 87.8 bits (96), Expect = 1e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 65695 CTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCG 65754
|||||| ||||| | |||||| | || ||||| ||||||| ||| || || || |||||
Sbjct 194186 CTCCTTCGCAAGCTCACAGCTCGCATCAAGTGCTGCAAAATGAATCGTTTCAAATATGCG 194245
Query 65755 TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTC 65814
||| | |||| ||||| | || |||||||| | || || |||||| ||
Sbjct 194246 CAAATTTACGGCACGCGCCTCCTTTGAATCATACGGCATCCTCAGCATCACAAAAACATC 194305
Query 65815 GGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850
|| || || || ||||||| ||||||||||||||
Sbjct 194306 AGCAAGGCCCTGCACTCCAAGGCCGATGGGACGATG 194341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566163608560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |