Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3030 250 4e-64 seq1824 246 5e-63 seq1823 161 1e-37 seq4530 123 4e-26 >seq3030 Length=217 Score = 250 bits (276), Expect = 4e-64 Identities = 184/209 (88%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 22 TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTG 81 ||||||| |||| ||||||| |||||||||||||||| |||||||||||| ||| ||||| Sbjct 216 TCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-CCTCGTTGAAGAACAATAATTG 159 Query 82 CAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTACCCGGACCTGTCGGCCAAGG 140 ||||| |||||||||| ||||| |||||||||| | |||||| |||||| ||||||||| Sbjct 158 CAATGTTCTATCCCCAGCACGACAAAATTTCAAAAGTTTACCCAGACCTGCCGGCCAAGG 99 Query 141 -TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 || | ||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct 98 ATGTAAAACTCGCTGGTTTTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 39 Query 200 TCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||| |||||||| Sbjct 38 TCACAGACCTGTTATTGCCTAAAACTTCC 10 >seq1824 Length=217 Score = 246 bits (272), Expect = 5e-63 Identities = 183/209 (88%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 22 TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTG 81 ||||||| |||| ||||||| |||||||||||||||| |||||||||||| ||| ||||| Sbjct 2 TCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-CCTCGTTGAAGAACAATAATTG 59 Query 82 CAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTACCCGGACCTGTCGGCCAAGG 140 ||||| |||||||||| ||||| |||||||||| | |||||| ||||| ||||||||| Sbjct 60 CAATGTTCTATCCCCAGCACGACAAAATTTCAAAAGTTTACCCAGACCTTCCGGCCAAGG 119 Query 141 -TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 || | ||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct 120 ATGTAAAACTCGCTGGTTTTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 179 Query 200 TCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||| |||||||| Sbjct 180 TCACAGACCTGTTATTGCCTAAAACTTCC 208 >seq1823 Length=328 Score = 161 bits (178), Expect = 1e-37 Identities = 116/130 (89%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 201 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 258 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTC-AAAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||||| |||| || Sbjct 259 CTCGTTGAAGAACAATAATTGCAATGTTCTATCCCCAGCACGACAAAATTTCAAAAGTTT 318 Query 120 ACCCGGACCT 129 |||| ||||| Sbjct 319 ACCCAGACCT 328 >seq4530 Length=387 Score = 123 bits (136), Expect = 4e-26 Identities = 87/98 (89%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 132 CGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 ||||||||| || | ||||| || | |||||||||||||||||||||||||||||| Sbjct 386 CGGCCAAGGATGTAAAACTCGCTGGTTTTGTCAGTGTAGCGCGCGTGCGGCCCAGAACAT 327 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||| |||||||| Sbjct 326 CTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751961112670