Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3957 102 5e-20 seq1003 102 5e-20 seq652 102 5e-20 seq3958 82.4 4e-14 seq625 82.4 4e-14 >seq3957 Length=219 Score = 102 bits (112), Expect = 5e-20 Identities = 94/117 (80%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 210 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 155 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 154 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 98 >seq1003 Length=354 Score = 102 bits (112), Expect = 5e-20 Identities = 94/117 (80%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 145 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 200 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 201 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTCATCGTCTTCGA 257 >seq652 Length=206136 Score = 102 bits (112), Expect = 5e-20 Identities = 94/117 (80%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 183003 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 183058 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 183059 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTCATCGTCTTCGA 183115 >seq3958 Length=217 Score = 82.4 bits (90), Expect = 4e-14 Identities = 81/103 (79%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 99 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 44 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103 ||| |||||||||||||||| |||||||||||||||||||| Sbjct 43 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTAT 1 >seq625 Length=217 Score = 82.4 bits (90), Expect = 4e-14 Identities = 81/103 (79%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||| |||| | |||| ||| || | | | ||| | || |||| Sbjct 99 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCTGAACCTGACCAAAGGTCAAG---GCCC 44 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103 ||| |||||||||||||||| |||||||||||||||||||| Sbjct 43 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278386067820