Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq652 129 1e-27 seq417 129 1e-27 seq3957 87.8 3e-15 seq1003 87.8 3e-15 >seq652 Length=206136 Score = 129 bits (142), Expect = 1e-27 Identities = 182/248 (73%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGG 132 |||| ||| |||| ||| || |||||| |||||| || | |||| ||||||||| Sbjct 183362 TTACCATGAGCAAATCAGAATGCTCAAAGTAGGCCTAAGCGCCTGAATGTGTTAGCATGG 183303 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC-GTAATGATT 191 |||||| |||||||| | | | | |||||||||||| ||| | |||||| Sbjct 183302 AATAATGAAATAGGACTCGAGTCT-TGTTTTGTTGGTTTACTTGACATTGAGAAATGATG 183244 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| | |||||||||||||||||||| Sbjct 183243 AATAGGAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTTGGATTGGCC 183184 Query 252 GAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||||||||||||||| || ||| |||| ||||||||| ||||| | || ||| Sbjct 183183 GAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCAG-GGACTAAA 183125 Query 311 GTT-AGGG 317 ||| |||| Sbjct 183124 GTTGAGGG 183117 >seq417 Length=827 Score = 129 bits (142), Expect = 1e-27 Identities = 182/248 (73%), Gaps = 7/248 (3%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATGG 132 |||| ||| |||| ||| || |||||| |||||| || | |||| ||||||||| Sbjct 570 TTACCATGAGCAAATCAGAATGCTCAAAGTAGGCCTAAGCGCCTGAATGTGTTAGCATGG 629 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC-GTAATGATT 191 |||||| |||||||| | | | | |||||||||||| ||| | |||||| Sbjct 630 AATAATGAAATAGGACTCGAGTCT-TGTTTTGTTGGTTTACTTGACATTGAGAAATGATG 688 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||| | || ||||| | ||||| | |||||||||||||||||||| Sbjct 689 AATAGGAACGGTTGGGGGCATTTGTATTTGGCCGCTAGAGGTGAAATTCTTGGATTGGCC 748 Query 252 GAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||||||||||||||| || ||| |||| ||||||||| ||||| | || ||| Sbjct 749 GAAGACAAACTACTGCGAAAGCATTTGACCCAGGACGTTTTCATTGATCAG-GGACTAAA 807 Query 311 GTT-AGGG 317 ||| |||| Sbjct 808 GTTGAGGG 815 >seq3957 Length=219 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/92 (84%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGAT 286 |||||||||||||||||||| |||||| ||||||||||||||| || ||| |||| Sbjct 6 AGAGGTGAAATTCTTGGATTGGCCGAAGACAAACTACTGCGAAAGCATTTGACCCAGGAC 65 Query 287 GTTTTCATTAATCAGTGAACGAAAGTT-AGGG 317 ||||||||| ||||| | || |||||| |||| Sbjct 66 GTTTTCATTGATCAG-GGACTAAAGTTGAGGG 96 >seq1003 Length=354 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/92 (84%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGAT 286 |||||||||||||||||||| |||||| ||||||||||||||| || ||| |||| Sbjct 349 AGAGGTGAAATTCTTGGATTGGCCGAAGACAAACTACTGCGAAAGCATTTGACCCAGGAC 290 Query 287 GTTTTCATTAATCAGTGAACGAAAGTT-AGGG 317 ||||||||| ||||| | || |||||| |||| Sbjct 289 GTTTTCATTGATCAG-GGACTAAAGTTGAGGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915151146624