Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2858 219 2e-54 seq3552 196 2e-47 seq2154 77.0 1e-11 >seq2858 Length=865 Score = 219 bits (242), Expect = 2e-54 Identities = 232/301 (77%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| ||||| || || | ||||||||| |||||||||||||||||| | ||| ||| Sbjct 535 GGCATAATGATTTTATATGACCCGTCTTGAAACACGGACCAAGGAGTCCACCATAGTTGC 476 Query 448 GAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 |||| |||| |||| ||| ||| || |||||| |||| ||| | || | ||| | | Sbjct 475 GAGTCTTTGAGTGTAAAAACCCATGGGCGTAAGGAAACTGACCA-AGATATGAAGGCCTT 417 Query 507 AGGGTG-CACCATCGACCGATCCTGATGTCTTCGGATGGATTT---GAGTAAGAGCATAG 562 || || || ||| ||| || || || || ||| ||| | |||| Sbjct 416 TGGCTGGCAATATCCTCCGGCGAGGACGTTTTATACTGAATTGACCGAGAGAAAGCACCT 357 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 356 ATGATGGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCT 297 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 |||||| ||||| |||| ||||| |||||||||||||||||||||||| ||||||||||| Sbjct 296 GGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCG 237 Query 683 A 683 | Sbjct 236 A 236 >seq3552 Length=904 Score = 196 bits (216), Expect = 2e-47 Identities = 152/181 (84%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 || ||| ||||| |||||||||||||||||| |||||||||||| | |||| ||||| Sbjct 244 CTGCGAAGAGTCAGGTTGTTTGGGAATGCAGCCTAAAATGGGAGGTAGACTTCTCCTAAA 185 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||||| | | |||||||||||| ||||||| |||| |||||||||||||||| Sbjct 184 GCTAAATATTGACGAAAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCAC 125 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||| |||||| || |||||| ||||||||||| |||||||||| || || || ||| | Sbjct 124 TTTGAAAAGAGGGTCAAAAAGTACGTGAAATTGCTGAAAGGGAACCGTATGAAATCAGCC 65 Query 213 T 213 | Sbjct 64 T 64 >seq2154 Length=1180 Score = 77.0 bits (84), Expect = 1e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||| ||||| |||||||||||||||||||||||| |||||||||||| Sbjct 1073 TCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 1022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079885499900