Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1824 284 2e-74 seq3030 279 1e-72 seq1823 176 9e-42 seq4530 163 5e-38 >seq1824 Length=217 Score = 284 bits (314), Expect = 2e-74 Identities = 189/209 (90%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 102 TGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 161 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 TGGAAGTTTTAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 150 Query 162 CTACACTGACAGAGCCAACGAGTTCATCA-CCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220 ||||||||||| | ||| |||||| || ||||||||||||||||||||||| ||| | Sbjct 149 CTACACTGACAAAACCAGCGAGTTTTACATCCTTGGCCGGAAGGTCTGGGTAAACTTTTG 90 Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||| |||| Sbjct 89 AAATTTTGTCGTGCTGGGGATAGAACATTGCAATTATTGTTCTTCAACGAGGAATTCCTA 30 Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||| ||||||||| |||||||| Sbjct 29 GTAAGCGCAAGTCATCAGCTTGCGTTGAT 1 >seq3030 Length=217 Score = 279 bits (308), Expect = 1e-72 Identities = 188/209 (90%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 102 TGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 161 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9 TGGAAGTTTTAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 68 Query 162 CTACACTGACAGAGCCAACGAGTTCATCA-CCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220 ||||||||||| | ||| |||||| || |||||||||| |||||||||||| ||| | Sbjct 69 CTACACTGACAAAACCAGCGAGTTTTACATCCTTGGCCGGCAGGTCTGGGTAAACTTTTG 128 Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||| |||| Sbjct 129 AAATTTTGTCGTGCTGGGGATAGAACATTGCAATTATTGTTCTTCAACGAGGAATTCCTA 188 Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||| ||||||||| |||||||| Sbjct 189 GTAAGCGCAAGTCATCAGCTTGCGTTGAT 217 >seq1823 Length=328 Score = 176 bits (194), Expect = 9e-42 Identities = 115/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261 |||||||||||| ||| | ||| | |||||||||||||||||| |||||||||||||| | Sbjct 328 AGGTCTGGGTAAACTTTTGAAATTTTGTCGTGCTGGGGATAGAACATTGCAATTATTGTT 269 Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct 268 CTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCC 209 Query 322 CTTTGTA 328 ||||||| Sbjct 208 CTTTGTA 202 >seq4530 Length=387 Score = 163 bits (180), Expect = 5e-38 Identities = 158/204 (77%), Gaps = 23/204 (11%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT----------------GGC-- 61 || ||||||||||| ||||||||||||| |||| |||| ||| Sbjct 184 GAACGAGACCTTAATCTGCTAAATAGCCGGGCCAACTTTTTAGTTGGTACTATGGGGCCT 243 Query 62 ---GGGTCGCCGGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAA 117 || || |||||||||||||| ||||| | | ||| | ||||||||| |||||| Sbjct 244 TCGGGCTCCCCGGCTTCTTAGAGAGACTACTGAATTCAATTCAGTGGAAGTTTTAGGCAA 303 Query 118 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 304 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAAAACC 363 Query 178 AACGAGTTCATCA-CCTTGGCCGG 200 | |||||| || |||||||||| Sbjct 364 AGCGAGTTTTACATCCTTGGCCGG 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947149438464