Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq3466 122 1e-22 seq2869 116 5e-21 >seq3466 Length=2213 Score = 122 bits (134), Expect = 1e-22 Identities = 328/497 (66%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 162343 CACGTTAAGGTTTCATTTGATCAGCCTGAATACACAGCACAGACCGACGCATTGGGCACT 162402 ||||| ||||| || || ||| | |||||||||| | | || || | ||||| Sbjct 283 CACGTCAAGGTGTCCTTCGATATGTCTGAATACACTGGTGATGTAGATGCTCTCGGCACC 342 Query 162403 CTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGGTATGGA--ATCATACGTAAGAATCTACC 162460 || | || |||| ||| ||||| |||| || ||| | || | |||||| Sbjct 343 CTTCGTCTGTTAGATGCCATCCGTACCTGTGGTCTGACCGATCGT--GTGCGCTTCTACC 400 Query 162461 AAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTC 162520 |||| |||| ||| || || || ||| ||| || || || || |||||||| | Sbjct 401 AAGCCTCCACCTCTGAACTGTACGGCAAGGTTGTGGAAACCCCGCAAAAGGAAACCACCC 460 Query 162521 CAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAA 162580 | | || || || || || || || || || || || || || | |||||| || | Sbjct 461 CCTTCTACCCCCGCTCTCCCTACGGTGTGGCCAAGCTCTACGGTTACTGGATTGTCGTCA 520 Query 162581 ACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCT 162640 ||||| | ||| || |||| | |||| || |||||| || ||||| |||||| Sbjct 521 ACTACCGTGAATCATACAACATGTACGCCTGTAACGGTATCCTCTTCAACCACGAATCTC 580 Query 162641 CACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTG 162700 | ||| | || ||||| ||||| ||||||||| ||| ||| || || || | Sbjct 581 CCCGCCGTGGCCGCACGTTTGTCACCCGCAAGATCTCCCGTGCCGTGGCCGATATCCATC 640 Query 162701 TGGGACTCCAA-AGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACAC 162759 | || | ||| | || ||| | || || ||| | ||||| ||||| ||||| || Sbjct 641 TCGGTCGTCAAGAATG-TCTGTATCTCGGTAACATTGATGCCAAGCGTGATTGGGGCCAT 699 Query 162760 GCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTAT 162819 || ||||| || || | |||||||||||||| |||||||| | || || || | | Sbjct 700 GCGCGTGACTATGTCGAAGGCATGTGGTTGATGCTGCAGCAAGACGAACCCGAAGACTTT 759 Query 162820 GTGATCGCAACTGGTGA 162836 || | || ||||| || Sbjct 760 GTCCTGGCCACTGGCGA 776 >seq2869 Length=18354 Score = 116 bits (128), Expect = 5e-21 Identities = 259/386 (67%), Gaps = 2/386 (1%) Strand=Plus/Minus Query 162452 GAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAG 162511 || ||||||||||| ||| ||| || || || ||| |||||| ||||| || | Sbjct 10283 GATTCTACCAAGCGTCGACCTCTGAACTGTACGGCAAAGTAGTGGAGACCCCCCAAAAGG 10224 Query 162512 AAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGA 162571 ||||||| || | || || || || || ||||| || || || || ||||| | ||||| Sbjct 10223 AAACCACCCCCTTCTACCCCCGCTCTCCATATGGTGTGGCCAAGCTCTATGGTTACTGGA 10164 Query 162572 TCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATC 162631 || || ||||| | ||| || |||| |||||| || |||||| || ||||| | Sbjct 10163 TCGTCGTGAACTATCGTGAATCTTACAACATGTATGCCTGTAACGGTATCCTCTTCAACC 10104 Query 162632 ACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCC 162691 | ||| | | || | || || || ||||| ||||||||| || || || | Sbjct 10103 ATGAATCCCCTCGTCGTGGCCGTACCTTTGTCACCCGCAAGATCTCTCGTGCTGTGGCGG 10044 Query 162692 GAATTAGTGTGGGAC-TCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGAC 162750 || | | || | || | |||| || | || || ||| || ||||| ||||| Sbjct 10043 ATATCCATCTCGGTCGTCAAGAGTG-CCTTTATCTCGGCAACATCGATGCCAAGCGTGAT 9985 Query 162751 TGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCA 162810 ||||| || || ||||| || || | ||||||| ||||| | || ||||| | || Sbjct 9984 TGGGGTCATGCTCGGGACTATGTGGAAGGTATGTGGCTGATGTTGCAACAAGATCAACCT 9925 Query 162811 GATGATTATGTGATCGCAACTGGTGA 162836 || || | ||| | || || ||||| Sbjct 9924 GACGACTTTGTCTTGGCTACCGGTGA 9899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691413062384880