Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4659 143 1e-28 seq4683 114 5e-20 seq4721 98.7 4e-15 >seq4659 Length=1022208 Score = 143 bits (158), Expect = 1e-28 Identities = 282/414 (68%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 12575 AGGAAGGAACCCGGTTTCATCCAG---AGTAGCTCTCTTTCTCCAATAAGGTTGATGGTG 12631 ||||||| |||| |||||| | | || || | ||| ||||| | ||| |||| Sbjct 637356 AGGAAGGCACCCTTTTTCATGTAACCCATTATTTCACGTTCACCAATCATGTTCTTGGTT 637297 Query 12632 TCTTTGGTATCTGGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTTGCAGA 12691 |||| || || || |||| || |||||||| | | |||||||| ||| || | Sbjct 637296 TCTTCCAGTTCCGGTACATGCAGTGTAACAAAGTCAGCAATGGACAAGAGTTCTTCCA-A 637238 Query 12692 GTAGACACTT-GCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAAAAC 12750 | | | || | || | | || ||||| | | | || |||||||||||| | || Sbjct 637237 GGATTCTGTTTGTTTGGCGGTACCAAGAGGCATGATTTGCAGCACATCGTAAAAGTATAC 637178 Query 12751 TTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTAC 12810 |||| || | | | || || || ||||||| |||| |||||| | |||||| ||||| Sbjct 637177 CGTCATCCCCATAGATTCGGCCAGTACAGAGAGTTGAGCACCAATATGACCATAGCCTAC 637118 Query 12811 TATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTCTTGTTCCAAATGCC 12870 ||||||||| |||| || | | |||| ||| | ||| ||||||||| | || Sbjct 637117 AATACCTAGGATCTTGCCACGGATTTCATAGCAGTTCTTAGAGACCTTGTTCCACACACC 637058 Query 12871 TTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCCTAT 12930 ||| || | |||| |||||| ||| || | || || | |||| | || | || || || Sbjct 637057 TTGATGCATTTCTATGTTTCGATCGCCTAGTTGTCGGGCAAGAGTGATCACTTCGCCAAT 636998 Query 12931 GATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAAT 12984 || ||| |||||||| ||| | ||||| ||||| || || ||||| || || Sbjct 636997 GACGAGTTCTGCCACCGATCTCGAGTTGCTGAAGGGTGAGTTGAAGACGGCGAT 636944 >seq4683 Length=165645 Score = 114 bits (126), Expect = 5e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||||||||| ||||||| | |||| |||||||||| || || ||||| Sbjct 104704 CCGATCGTCATACGAGAAGGAATGGCGTGAGGATTGATGATGAGATCGGGGGTGATGCCT 104645 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || ||||||||||| | ||||| | || | ||| |||||| || ||||||||| | Sbjct 104644 TCGGCGGTAAAGGGGAAGTCTTCTTGTCGATAGGTGATACCAATAGTGCCCTTTTGCCCG 104585 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | |||||||||||||||||| || || Sbjct 104584 TGGCGAGAAGCAAACTTGTCACCCAT 104559 >seq4721 Length=291394 Score = 98.7 bits (108), Expect = 4e-15 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||||||||||||||||| | | ||||||||||| | ||| || ||||| Sbjct 261330 CCGATCGTCATACGAGAGGGAATGGCGTGCGGGTTGATGATCAAGTCGGGGGTGATGCCT 261389 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||| || || | ||||| | || | ||| ||||| || || ||||| || Sbjct 261390 TGTGCGGTGAATGGGAAGTCTTCTTGTCGATAGGTGATTCCAATAGTGCCTTTTTGACCA 261449 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | |||||| |||||||||||||| || ||||| Sbjct 261450 TGGCGAGAGGCAAACTTGTCGCCCAT--CTGGG 261480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884757486728834