Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10 181 4e-43 >seq10 Length=558796 Score = 181 bits (200), Expect = 4e-43 Identities = 232/312 (74%), Gaps = 17/312 (5%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 |||| ||||| | ||| ||||||||||| |||||||||||||||||| | || || Sbjct 10501 TGGCTTAATGACTCTAAATGGCCCGTCTTGAAACACGGACCAAGGAGTCCACCACAGGTG 10442 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGC-GCGTAATGAAAGTGA-ACGG--AGGTGGGAAC- 501 ||||| || ||||| ||||||| | ||| ||||||||||| || || | || Sbjct 10441 CGAGTATTAGGGTGGCAAACCCATAATGCGCAATGAAAGTGACACTTTAAGCTACCAAGG 10382 Query 502 --CCGTGAGGG---TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 || | |||| |||| | | | | || || || || | | || ||| Sbjct 10381 TTCCTTCAGGGGCCTGCAGTAGCCTCAGGCATGGACGTTTTATACTGAAAT-GACCTAGA 10323 Query 557 GCATAGC-----TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 | | ||| || ||||||||||||||||||||||||||| ||| |||| |||||||| Sbjct 10322 GAA-AGCACTTGTGATGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGATGAAGCCA 10264 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 ||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||| Sbjct 10263 GAGGAAACTCTGGTGGAGGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCAAACTTGA 10204 Query 672 GTATAGGGGCGA 683 | |||||||||| Sbjct 10203 GCATAGGGGCGA 10192 Score = 158 bits (174), Expect = 5e-36 Identities = 136/166 (82%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG-GGAGGTAAATTTCTTCTAAA 92 ||| | ||||| |||||||||||||||||| ||||| || ||||||| | ||||| Sbjct 10963 TTCAAAGAGTCAGGTTGTTTGGGAATGCAGC-CTAAAGCTGGTGGTAAATCCCACCTAAA 10905 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 |||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| || Sbjct 10904 GCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAAC 10845 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 |||| ||||||||||||| || | ||||||||| | |||||||| Sbjct 10844 TTTGAAAAGAGAGTTAAACAGTATGTGAAATTGCCAAGAGGGAAGC 10799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998412700