Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451
15.1_202014-08-05] 74 sequences; 30,708,998 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq36 91.5 4e-16
>seq36
Length=47271
Score = 91.5 bits (100), Expect = 4e-16
Identities = 211/317 (67%), Gaps = 22/317 (7%)
Strand=Plus/Minus
Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90
||||||||||| |||||||||||| || | |||| ||| || |||| |||| |||
Sbjct 38660 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 38601
Query 91 AGCGTGCGCAGGCGGTTGTGTAAGACAG-----GTGTGAAATCCCCGGGCTTAACCTGGG 145
|| || || |||| ||| |||||| | || | ||| || ||| |
Sbjct 38600 AGGGTACGTAGGCTGTTTCATAAGACTGTATTTGTTTCAAA--------CTAAAC----G 38553
Query 146 AATTGCA--TTT---GTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200
||| | ||| || ||| |||||||||| |||| | |||| ||| |
Sbjct 38552 AATAAAAACTTTCCAGTAACTATGAAACTAGAGTGTAATGGAGGAAAGAGGAACTCCGAG 38493
Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260
|||| || ||| || ||| | ||| || | | | ||||||||| | ||
Sbjct 38492 AGTAGGGATGGAATCTGTTGATCTTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTAAC 38433
Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320
|||||||||||| | | ||||||| ||||||||||| ||||||||||||| ||||
Sbjct 38432 TAAACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGATACCCGTGTAG 38373
Query 321 TCCACGCCCTAAACGAT 337
|||| || ||||||||
Sbjct 38372 TCCATACCGTAAACGAT 38356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289599045696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |