Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 4e-16 >seq36 Length=47271 Score = 91.5 bits (100), Expect = 4e-16 Identities = 211/317 (67%), Gaps = 22/317 (7%) Strand=Plus/Minus Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90 ||||||||||| |||||||||||| || | |||| ||| || |||| |||| ||| Sbjct 38660 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 38601 Query 91 AGCGTGCGCAGGCGGTTGTGTAAGACAG-----GTGTGAAATCCCCGGGCTTAACCTGGG 145 || || || |||| ||| |||||| | || | ||| || ||| | Sbjct 38600 AGGGTACGTAGGCTGTTTCATAAGACTGTATTTGTTTCAAA--------CTAAAC----G 38553 Query 146 AATTGCA--TTT---GTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACG 200 ||| | ||| || ||| |||||||||| |||| | |||| ||| | Sbjct 38552 AATAAAAACTTTCCAGTAACTATGAAACTAGAGTGTAATGGAGGAAAGAGGAACTCCGAG 38493 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 |||| || ||| || ||| | ||| || | | | ||||||||| | || Sbjct 38492 AGTAGGGATGGAATCTGTTGATCTTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTAAC 38433 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 |||||||||||| | | ||||||| ||||||||||| ||||||||||||| |||| Sbjct 38432 TAAACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGATACCCGTGTAG 38373 Query 321 TCCACGCCCTAAACGAT 337 |||| || |||||||| Sbjct 38372 TCCATACCGTAAACGAT 38356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289599045696