Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq36 109 8e-22 >seq36 Length=47271 Score = 109 bits (120), Expect = 8e-22 Identities = 167/239 (70%), Gaps = 23/239 (10%) Strand=Plus/Minus Query 10 CCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTG 69 ||| ||| | ||||| |||||| |||||||| | || || | || ||| |||| ||| Sbjct 33395 CCAGCACTGAGCAGGTATCAGTCTTTATACATCTAGTTTCC-TATTAGCAAAGACCGGTG 33337 Query 70 TTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGT 129 |||| |||||||||||| | |||||||| ||| || || | | | ||||| Sbjct 33336 TTTTAAGTAAACAGTCGTACTCTTCTATTCTGTGCCACGACTATAA-------AAGTCGT 33284 Query 130 TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189 || |||||| |||||||||||| | ||||||||||| |||||| | Sbjct 33283 --------------ACTCCTTCTTCCGAAGTTACGGAGTCATTTTGCCGAGTTCCTTCAA 33238 Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| | | |||||||| |||| ||||||| | ||| ||||||||||| |||| Sbjct 33237 GATGATTCGCTC-AACGCCTTGGTATACTCTACCAGCAGACCAGTGTCGGTTTAGGGTA 33180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694399502202