Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 1e-14 >seq36 Length=47271 Score = 86.0 bits (94), Expect = 1e-14 Identities = 167/246 (68%), Gaps = 18/246 (7%) Strand=Plus/Plus Query 111 GGGACAGTG-TCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||||| | | | ||||||||| ||||||||| |||||| | |||| ||||| Sbjct 33728 GGGACAGTGATTAAT-GGGCAGTTTATCTGGGGCGGATTTCTCCCATATAGTACCGGAGA 33786 Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCA-TGCGCACA---------------GT 213 | | ||| | || | |||||||||||||| || || | || Sbjct 33787 AGTACGAAGGTCGGCTTAAATTGGATGGAAACCAATGGGCTAAAGAGAGCCTAATTAAGT 33846 Query 214 GCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGG 273 | || |||| ||| | || |||| | || |||||| ||| ||| |||| || Sbjct 33847 GTAATGGCATAAGCCGGCTTAACTGTAAGACTGACAAGTCATACAGATACGCAAGTAGGT 33906 Query 274 CTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTG 333 | || |||||||| ||| | |||||| |||| |||||| ||| ||||||||||| || Sbjct 33907 CATAGTGATCCGGTGGTACATTATGGAATGGCCATCGCTCAACGAATAAAAGCTACGCTA 33966 Query 334 GGGATA 339 |||||| Sbjct 33967 GGGATA 33972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982399273024