Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451
15.1_202014-08-05] 74 sequences; 30,708,998 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq36 86.0 1e-14
>seq36
Length=47271
Score = 86.0 bits (94), Expect = 1e-14
Identities = 167/246 (68%), Gaps = 18/246 (7%)
Strand=Plus/Plus
Query 111 GGGACAGTG-TCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
||||||||| | | | ||||||||| ||||||||| |||||| | |||| |||||
Sbjct 33728 GGGACAGTGATTAAT-GGGCAGTTTATCTGGGGCGGATTTCTCCCATATAGTACCGGAGA 33786
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCA-TGCGCACA---------------GT 213
| | ||| | || | |||||||||||||| || || | ||
Sbjct 33787 AGTACGAAGGTCGGCTTAAATTGGATGGAAACCAATGGGCTAAAGAGAGCCTAATTAAGT 33846
Query 214 GCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGG 273
| || |||| ||| | || |||| | || |||||| ||| ||| |||| ||
Sbjct 33847 GTAATGGCATAAGCCGGCTTAACTGTAAGACTGACAAGTCATACAGATACGCAAGTAGGT 33906
Query 274 CTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTG 333
| || |||||||| ||| | |||||| |||| |||||| ||| ||||||||||| ||
Sbjct 33907 CATAGTGATCCGGTGGTACATTATGGAATGGCCATCGCTCAACGAATAAAAGCTACGCTA 33966
Query 334 GGGATA 339
||||||
Sbjct 33967 GGGATA 33972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982399273024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |