Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451
15.1_202014-08-05] 74 sequences; 30,708,998 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq36 118 2e-24
>seq36
Length=47271
Score = 118 bits (130), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA-AGGACAGCTCCTCTC 138
||| ||| |||||||||| | | |||||||||||||||| || | | || | ||
Sbjct 34218 AACAGGTATACCAGAGGTTCATATCACTCGGTCCTCTCGTACTAGAGTAATGTTCTTGTC 34159
Query 139 AAATTTCCTACGCCCACGACG-GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAG 197
||| ||| ||| | |||||| |||| |||||||| |||||| || ||||||
Sbjct 34158 CGATT--CTAATTCCATTAGTAGATAGGAACCGTACTGTCTCACGACGTACTTAACCCAA 34101
Query 198 CTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGA 257
||| ||| || |||| | ||||||||||| ||||||||||| | || || ||||||||
Sbjct 34100 CTCACGTACCCTTTTACTCGGCGAACAGCCGAACCCTTGGGAGCGCCTACACCCCCAGGA 34041
Query 258 TGAGACGAGCCGACATCG 275
| || ||| ||||||||
Sbjct 34040 TAGGATGAGTCGACATCG 34023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780799440264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |