Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq36 141 3e-31 >seq36 Length=47271 Score = 141 bits (156), Expect = 3e-31 Identities = 235/334 (70%), Gaps = 9/334 (3%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| ||||||||||||||||||||||||||| | | |||| ||| | ||||||| Sbjct 38903 GATTAGGTAGTTGGTAAGGTAACGGCTTACCAAGCCAATGATCTATAGTTGGTCTGAGAG 38844 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA--GGCAGCAGTG 284 | ||||| ||||| ||| | ||| | | || ||| || | | | |||||||||| Sbjct 38843 GATGATCAACCACAGTGGGAATGA-AAAAGGCCCACACGAGCAAAGTATCGGCAGCAGTG 38785 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 ||||| ||| |||||| | |||| |||| ||| || | || |||| | | Sbjct 38784 AGGAATCTTGGTCAATGGCCGAAAGGCTGAACCAGTCAC----CTAGAAGGATGGATACA 38729 Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCC 404 || | ||||| || | ||||| ||||||||| |||||| | || ||| Sbjct 38728 TTAATTTGATAAAGTCCTAACGGAAAGGAGGATAATGACTGTACTTTCCTATTAA-TCCC 38670 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 | | || ||||||||||| |||||||||||| |||| ||| |||| | |||| Sbjct 38669 GACCAATCTCGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAA 38610 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| | |||||||| |||||| ||||| |||| Sbjct 38609 TGGGTC-TAAAGGGTACGTAGGCTGTTTCATAAG 38577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497598891776