Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq36 114 3e-23 >seq36 Length=47271 Score = 114 bits (126), Expect = 3e-23 Identities = 219/317 (69%), Gaps = 18/317 (6%) Strand=Plus/Minus Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88 ||||||||||| |||||||||||| |||| ||| |||| | |||| |||| ||| Sbjct 38660 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 38601 Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG-GACT 147 ||||| |||||| ||||| |||| | || | | || |||| | || | Sbjct 38600 AGGGTACGTAGGCTGTTTCATAAGAC-----TGTA----TTTGTTTCAAACTAAACGAAT 38550 Query 148 G----CTTTTGA--AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGT 201 |||| | |||| |||||||| | | || ||| |||| ||| || || Sbjct 38549 AAAAACTTTCCAGTAACTATGAAACTAGAGTGTAATGGAGGAAAGAGGAACTCCGAGAGT 38490 Query 202 AGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTG 261 || | || ||| || ||| || ||| || | | ||||||||| ||| || ||| Sbjct 38489 AGGGATGGAATCTGTTGATCTTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTA-ACTA 38431 Query 262 TA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTC 320 | |||||| |||||| |||||| ||||||||||| ||||||||||||| |||||| Sbjct 38430 AACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGATACCCGTGTAGTC 38371 Query 321 CACGCCGTAAACGATGA 337 || ||||||||||||| Sbjct 38370 CATACCGTAAACGATGA 38354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203199109632