Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10 673 0.0 seq3 93.3 1e-16 >seq10 Length=558796 Score = 673 bits (746), Expect = 0.0 Identities = 477/540 (88%), Gaps = 6/540 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 8423 CTTTTGCTCTACGTGAGATTTCTGTTCTCACTGAGTCCCCCTTAGGACACCTGCGTTATT 8482 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||| ||||||||||| | | || || Sbjct 8483 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATATCGTGGGTC 8542 Query 127 GGCCCGCGAAGGAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185 | | | | | ||||| | |||| || | || ||||| || ||| | | Sbjct 8543 ACCTAACAATGTAGGCTTAATACTAGAACATAGGTATTGCTACCCAGTCCCACTTGAATA 8602 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACT 244 |||||||||||||| ||| ||| | ||||||||||| ||| ||||| | ||||| | Sbjct 8603 TTTAAGTAAAAAAACAATAGAGGTTGAGGTATTTCACTGGCGACCGAA--GTCTCCCTCA 8660 Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||| Sbjct 8661 TATGCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 8719 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 8720 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 8779 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8780 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 8839 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8840 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 8899 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 8900 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAATCACTTTCTG 8959 >seq3 Length=1146452 Score = 93.3 bits (102), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||| ||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 804721 GACAATGGGATTCTCGTTAATTCATTCATGCGTGTCACTAATTAGATGACCAGGCATTTG 804780 Query 429 GC-TACCT 435 || ||||| Sbjct 804781 GCATACCT 804788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198789952