Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq92 95.1 7e-18 seq83 95.1 7e-18 seq81 95.1 7e-18 seq66 95.1 7e-18 seq64 95.1 7e-18 seq51 95.1 7e-18 seq38 95.1 7e-18 seq75 86.0 4e-15 >seq92 Length=1503 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 869 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 927 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 928 TAAT-CAACGCAAGCT 942 >seq83 Length=4747 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 3774 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3832 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 3833 TAAT-CAACGCAAGCT 3847 >seq81 Length=6015 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 2558 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 2616 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 2617 TAAT-CAACGCAAGCT 2631 >seq66 Length=33588 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 5877 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5935 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 5936 TAAT-CAACGCAAGCT 5950 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 16802 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 16860 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 16861 TAAT-CAACGCAAGCT 16875 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 27683 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 27741 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 27742 TAAT-CAACGCAAGCT 27756 >seq64 Length=41095 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 3870 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3928 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 3929 TAAT-CAACGCAAGCT 3943 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 14237 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 14295 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 14296 TAAT-CAACGCAAGCT 14310 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 24641 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 24699 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 24700 TAAT-CAACGCAAGCT 24714 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 35247 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 35305 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 35306 TAAT-CAACGCAAGCT 35320 >seq51 Length=151171 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 4816 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 4874 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 4875 TAAT-CAACGCAAGCT 4889 >seq38 Length=339068 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 320039 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 319981 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 319980 TAAT-CAACGCAAGCT 319966 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 330763 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 330705 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 330704 TAAT-CAACGCAAGCT 330690 >seq75 Length=10591 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| | | |||| ||||||||| ||||||||||| |||||||||||||| ||||| Sbjct 6006 CTCACTATGACCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA-GGACG 5949 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 5948 TAAT-CAACGCAAGCT 5934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799734920