Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq94 143 4e-32 seq75 143 4e-32 seq66 143 4e-32 seq64 143 4e-32 seq51 143 4e-32 seq38 143 4e-32 seq35 131 3e-28 seq11 89.7 8e-16 >seq94 Length=1315 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 1066 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 1009 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1008 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 951 >seq75 Length=10591 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 9715 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 9772 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 9773 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 9830 >seq66 Length=33588 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 2081 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 2024 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2023 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 1966 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 13006 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 12949 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 12948 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 12891 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 23889 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 23832 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 23831 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 23774 >seq64 Length=41095 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 10453 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 10396 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 10395 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 10338 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 20854 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 20797 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 20796 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 20739 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 31455 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 31398 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 31397 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 31340 Score = 87.8 bits (96), Expect = 3e-15 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 84 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 27 Query 61 GCCGCGAAGCTACCATCTGCTGGAT 85 ||||||||||||||||||||||||| Sbjct 26 GCCGCGAAGCTACCATCTGCTGGAT 2 >seq51 Length=151171 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 1030 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 973 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 972 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 915 Score = 127 bits (140), Expect = 3e-27 Identities = 111/134 (83%), Gaps = 3/134 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| ||||||| || ||||| || Sbjct 87273 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGTTGGTTGACCGACCAAA 87216 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC-C 119 || |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct 87215 GCTGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGCCAGAAGCCATGCTG 87156 Query 120 AGAACGGGGTGATT 133 | ||||| || ||| Sbjct 87155 AAAACGGTGTCATT 87142 >seq38 Length=339068 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 323831 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 323888 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 323889 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 323946 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | | || Sbjct 334559 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGCTGTCTTGCCAAA 334616 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 334617 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 334674 >seq35 Length=371557 Score = 131 bits (144), Expect = 3e-28 Identities = 113/136 (83%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| ||||||| || ||||| || Sbjct 26333 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGTTGGTTGACCGACCAAA 26390 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 || |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct 26391 GCTGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGCCAGAAGCCATGCTG 26450 Query 121 G-AACGGGGTGATTCT 135 | ||||| || ||||| Sbjct 26451 GAAACGGTGTCATTCT 26466 >seq11 Length=815227 Score = 89.7 bits (98), Expect = 8e-16 Identities = 56/59 (95%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCT-CTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||| Sbjct 630053 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCCCAAGTCAGAATCCATGC 630111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199254016