Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq164 136 2e-29 seq437 125 3e-26 seq1003 116 2e-23 seq203 107 8e-21 seq246 89.7 2e-15 seq172 89.7 2e-15 seq341 77.0 1e-11 >seq164 Length=118555 Score = 136 bits (150), Expect = 2e-29 Identities = 96/110 (87%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143 || ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct 68304 TCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGAT 68245 Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 |||| | |||||| ||||||||||||| || |||||||||||| ||||| Sbjct 68244 GAAAGGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTCAAAAGG 68195 >seq437 Length=260614 Score = 125 bits (138), Expect = 3e-26 Identities = 190/266 (71%), Gaps = 7/266 (3%) Strand=Plus/Plus Query 393 AATGGTTGTAAGCGGCCCGT-CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGT 451 |||| || ||| | ||||| |||| |||| | |||||||| ||||| ||| || | Sbjct 35353 AATGATTTTAAACAACCCGTACTTGAAACATGATTCAAGGAGTATAACAAATATACGGAT 35412 Query 452 GTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 ||| ||| |||| | | | ||||||||||||| ||| || | | | Sbjct 35413 ATTTAAGTGGTAAACTCATATGTGTAATGAAAGTGATTTT-GGTAAGAT----TTTCGAT 35467 Query 512 GCACCATCGACCGATCCTGATGTCTTCG-GATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 | |||| || |||| | | ||| || |||| | ||| |||||| ||||||| Sbjct 35468 ACCTCATCAACTGATCAAAGTTTTTTCATGAAGGATCTAAGTCTAAGCATATTTGTTGGG 35527 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct 35528 ACCTGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGTCAGAGAAAACTCTGATGGAGG 35587 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATC 656 | | ||| ||||| |||| | ||| Sbjct 35588 TTTGTAGCAGTTCTAACGTGTATATC 35613 >seq1003 Length=180766 Score = 116 bits (128), Expect = 2e-23 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| || | ||||||| ||| || ||||||||| ||||||||||||||||||||| Sbjct 103465 TAGGATGTTGACAAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 103524 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGA 487 || ||||||||| |||| ||| |||| | | ||||||||||||||| Sbjct 103525 CAAATATGCGAGTATTTGAGTGGTAAACTCATATGCGTAATGAAAGTGA 103573 >seq203 Length=105299 Score = 107 bits (118), Expect = 8e-21 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 18 AGCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG 77 ||| |||||| | | ||| | ||| || ||||||||||||||| | ||||||| || Sbjct 87708 AGCTGTGTGATACACTTTCAAAGAGCCGGACTGTTTGGGAATGCAGTCCAAAATGGGTGG 87767 Query 78 TAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCG 137 |||||||| | || ||||||||||| | | |||| ||||||| | ||||| |||| | Sbjct 87768 TAAATTTCATTTAGAGCTAAATATTAGAGAAAGACTGATAGCGAATAAGTACTGTGAGGG 87827 Query 138 AAAGATGAAAAG 149 |||||||||||| Sbjct 87828 AAAGATGAAAAG 87839 >seq246 Length=89804 Score = 89.7 bits (98), Expect = 2e-15 Identities = 101/135 (75%), Gaps = 14/135 (10%) Strand=Plus/Minus Query 68 AAATGGGAGGTAAATTTCTTCTAAA----GCTAAATATTGGCCAGAGACCGATAGCGCAC 123 ||||||| |||||||||| | |||| |||||||||||| |||||| || | || | Sbjct 42243 AAATGGGTGGTAAATTTCATATAAATAAAGCTAAATATTGGTGAGAGACTGACAACGAAT 42184 Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG-TTAAAAAGCACGTGAAA 182 ||||| | |||||| || |||||| |||||||| ||||| || |||||| Sbjct 42183 AAGTA---------ACCGATGAAGAGAACTTTGAAAAGAGAGTTTAAACAGTTGGTGAAA 42133 Query 183 TTGTTGAAAGGGAAG 197 ||||| ||||||||| Sbjct 42132 TTGTTAAAAGGGAAG 42118 >seq172 Length=114120 Score = 89.7 bits (98), Expect = 2e-15 Identities = 114/156 (73%), Gaps = 7/156 (4%) Strand=Plus/Minus Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT--TTCTTCTAAAGCTAAATATTGGC 105 || ||| ||||||||| | ||||||| | ||||| ||| | |||| ||||||||||| Sbjct 60968 TTATTTAGGAATGCAGTCCAAAATGGGTGATAAATATTTCATTGAAAGATAAATATTGGC 60909 Query 106 CAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG-----GAAA 160 | | || |||| | ||||||| || | |||||||||||| ||||| ||| Sbjct 60908 GAAAAACTGATAACAAACAAGTACTGTAAGAAAAAGATGAAAAGAGCTTTGAAAAAAAAA 60849 Query 161 GAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||| |||||| || || ||||||| | ||| |||| Sbjct 60848 GAGTGTTAAATAGTACTTGAAATTTTCAAAAAGGAA 60813 >seq341 Length=67476 Score = 77.0 bits (84), Expect = 1e-11 Identities = 87/116 (75%), Gaps = 7/116 (6%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA-GGAGTCTA 437 ||||||| || | ||||||| ||| || || ||||| || ||||||||| ||||||| Sbjct 6266 TAGGATGTTGACAAAATGGTTTTAAACGATCCATCTTGAAATACGGACCAAGGGAGTCTG 6207 Query 438 ACATCTATGCGAGTGTTTGGGTG------TCAAACCCGTGCGCGTAATGAAAGTGA 487 ||| ||||||||| |||| ||| ||| || | | | |||||||||| ||| Sbjct 6206 ACAAATATGCGAGTATTTGAGTGGTATACTCATACTCATACACGTAATGAAAATGA 6151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079977799250