Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq892 113 7e-23 seq297 96.9 6e-18 seq126 86.0 1e-14 >seq892 Length=188324 Score = 113 bits (124), Expect = 7e-23 Identities = 150/206 (73%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 53 CATCACAGACCTGTTATTGCCTCAAA-CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111 ||| | |||||| ||||| ||| ||| || |||| | | || | || ||||| ||| Sbjct 22880 CATTAAAGACCTATTATTTCCTTAAAACTACCATAGATTAAAAATCTCTAATCCCTTTAA 22939 Query 112 GAAGCCAGCCACCAACCATAGTCGATGGGGCTA----TTTAGCAGGTTAAGGTCTCGTTC 167 ||| |||| ||| ||| ||| | || |||| || |||||| |||||||| Sbjct 22940 AAAGTTAGCC--CAAGAATATAAGATTTGTGTAATTATTTAACAAGTTAAGATCTCGTTC 22997 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 |||| || ||||||||| ||||||| ||| | |||||||||| || ||||| | || | Sbjct 22998 GTTACCGAAATTAACCATACAAATCGCTCTATCAACTAAGAATAACCGTGCACTATCATC 23057 Query 228 CATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||| ||||| | ||||| Sbjct 23058 CATAGAATCAAAAAAGAACCCTCAAT 23083 >seq297 Length=79570 Score = 96.9 bits (106), Expect = 6e-18 Identities = 82/99 (83%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT--TAACCAGACAAATCACTCCAC 199 ||||||| ||||||| ||||||||| ||||| |||| ||||||||||||||||||| | Sbjct 29831 CTATTTACTAGGTTAAAGTCTCGTTCATTATCAGAATATTAACCAGACAAATCACTCCGC 29772 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||| || | || |||||||||| ||||||| || Sbjct 29771 CAATTAA-AATAGTCACTCACCACCACCTATAGAATTAA 29734 Score = 96.9 bits (106), Expect = 6e-18 Identities = 82/99 (83%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT--TAACCAGACAAATCACTCCAC 199 ||||||| ||||||| ||||||||| ||||| |||| ||||||||||||||||||| | Sbjct 33597 CTATTTACTAGGTTAAAGTCTCGTTCATTATCAGAATATTAACCAGACAAATCACTCCGC 33538 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||| || | || |||||||||| ||||||| || Sbjct 33537 CAATTAA-AATAGTCACTCACCACCACCTATAGAATTAA 33500 >seq126 Length=347927 Score = 86.0 bits (94), Expect = 1e-14 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 |||||||||||||||| ||||||||||||||||||||||||||| ||||||| | || Sbjct 236086 TCACTCCACCAACTAAAGACGGCCATGCACCACCACCCATAGAATTGAGAAAGAATTCTC 236027 Query 251 AATCT 255 ||||| Sbjct 236026 AATCT 236022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792010835