Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq249 423 3e-116 seq31 329 6e-88 seq50 237 3e-60 seq559 156 7e-36 seq407 147 4e-33 seq188 113 8e-23 seq237 89.7 9e-16 >seq249 Length=88883 Score = 423 bits (468), Expect = 3e-116 Identities = 272/296 (92%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 87301 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 87360 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 87361 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 87420 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87421 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 87480 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 87481 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCC 87540 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 87541 TGAAATTTCCAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 87596 >seq31 Length=1049 Score = 329 bits (364), Expect = 6e-88 Identities = 214/234 (91%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| ||||||| |||| | || | |||||||||||||||||||||||||||| Sbjct 816 TACTAAATTGAATTACTATTGCAACAACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 875 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 876 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTTAAG 935 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 936 AATTCTGCTTCTTAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 995 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 996 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCT 1049 >seq50 Length=169194 Score = 237 bits (262), Expect = 3e-60 Identities = 204/251 (81%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||| |||| ||| || |||||| |||||| ||||| ||||||||||||| Sbjct 56046 TAAAACTAACCTTTCTCGCGACTGTTTAAACCTAGCTCATGTTCCTTATTAGTGGGTGAG 56105 Query 103 CAATCCAACGCTTACC-GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 | ||||||| ||| |||||||| ||| |||||| ||||| |||| || ||| || Sbjct 56106 CGATCCAACACTTTTAAGAATTCTGTTTCTTAATGATAAGAAGAACCGATATTAAAGAAT 56165 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 ||||||| || |||||||||| | ||| ||| || ||| |||| ||| ||||||||||| Sbjct 56166 CAAAAAGTAATCTCGCTATGAATGTTTGACTGTCATAAGTCAGTCATCTCTGTGGTAACT 56225 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| |||||||| ||| ||||||| ||| ||||| ||||||||| ||||||||||| Sbjct 56226 TTTCTGACACCTCTAACCTGAAATTTCCAGGATCTAAAAGATCGATAGACCACACTTTCA 56285 Query 282 TGGTTTGTATT 292 | ||| |||| Sbjct 56286 TAATTTATATT 56296 >seq559 Length=223885 Score = 156 bits (172), Expect = 7e-36 Identities = 116/136 (85%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||| ||||| Sbjct 153580 GATCAAAAAGCAATGTCTCTACGAACGCTTGGCTGTCACAAGCCAGTTATCCCTATGGTA 153521 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278 | ||||||| |||| |||||| ||| ||| ||| ||||| |||||||| | || ||| Sbjct 153520 ATTTTTCTGATACCTTTAGCCTGAAACTTCCAGGATCTAAAAGATCGATAAGTCAAACTA 153461 Query 279 TCATGGTTTGTATTCA 294 |||| ||||||||||| Sbjct 153460 TCATAGTTTGTATTCA 153445 Score = 75.2 bits (82), Expect = 2e-11 Identities = 41/41 (100%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||| Sbjct 154830 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 154870 >seq407 Length=53628 Score = 147 bits (162), Expect = 4e-33 Identities = 89/94 (95%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17650 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 17591 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252 ||||||||| || ||||||||| || |||| ||| Sbjct 17590 ACTTTTCTGACATCTCTAGCCTGAATTTTCCAGG 17557 >seq188 Length=110278 Score = 113 bits (124), Expect = 8e-23 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 108075 GAACGCTTGGCTGTCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCCT 108016 Query 241 CAAATTTCGAGG 252 ||||||| ||| Sbjct 108015 GAAATTTCCAGG 108004 >seq237 Length=301894 Score = 89.7 bits (98), Expect = 9e-16 Identities = 77/94 (82%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA-GTTATCCCTGTGGT 217 ||||||||||||| || |||||||| |||| ||| | |||| | | |||||| ||||||| Sbjct 199834 GATCAAAAAGCAATGTTGCTATGAATGCTTAGCTTCAACAATCTAAGTTATCACTGTGGT 199775 Query 218 AACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 || || ||| |||||||||||| | ||||| || Sbjct 199774 AATTTCTCTATCACCTCTAGCCTGAGATTTCCAG 199741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854391156960