Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq775 98.7 1e-18 seq537 98.7 1e-18 >seq775 Length=10408 Score = 98.7 bits (108), Expect = 1e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGG 71 |||||||||||||||||||||| ||| ||||||||| | |||| |||||||||| ||||| Sbjct 2016 TTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCTTGAATACATTAGCATGG 2075 Query 72 AATAATAGAATA 83 ||||||| |||| Sbjct 2076 AATAATATAATA 2087 Score = 93.3 bits (102), Expect = 4e-17 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTC-AAAGCAGGCCTTTGCTCGAATACATTACCATG 70 |||||||||||||||||||||| ||| ||||||||| | |||| |||||||||| |||| Sbjct 3825 TTTTACTTTGAAAAAATTAGAGTGTTTTAAAGCAGGCTTATGCTTGAATACATTAGCATG 3766 Query 71 GAATAATAGAATA 83 |||||||| |||| Sbjct 3765 GAATAATATAATA 3753 >seq537 Length=228371 Score = 98.7 bits (108), Expect = 1e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGG 71 |||||||||||||||||||||| ||| ||||||||| | |||| |||||||||| ||||| Sbjct 221047 TTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCTTGAATACATTAGCATGG 220988 Query 72 AATAATAGAATA 83 ||||||| |||| Sbjct 220987 AATAATATAATA 220976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994866400