Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq252 102 2e-19 seq376 95.1 2e-17 >seq252 Length=88352 Score = 102 bits (112), Expect = 2e-19 Identities = 139/187 (74%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 |||||| | |||| || |||||||||||||||||||| |||||| ||||| | ||| Sbjct 12117 AAGTTTAAAATAATATCAAGTCTGTGATGCCCTTAGATGCTCTGGGTCGCACATACTCTA 12058 Query 165 CACT--GACAGAGCCAACGAGTT-CATC--ACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219 ||| || || ||||||||| |||| || | |||| ||| |||||||||| | Sbjct 12057 TACTAAGATGAAGTCAACGAGTTACATCTTTGATTACCTGGAAAGTCCGGGTAATCTTTT 11998 Query 220 TAAACTCT-GTCGTGCTGGGGA-TAGAGCATTGCAATTATT-GCTCTTCAACGAGGAATG 276 |||| | | |||| |||| || ||| | || ||||| || | |||||||||||||| Sbjct 11997 TAAAATTTCATCGTACTGGAGATTAGTCCCTTACAATTTTTGGAACTTCAACGAGGAATA 11938 Query 277 CCTAGTA 283 |||| || Sbjct 11937 CCTATTA 11931 >seq376 Length=60478 Score = 95.1 bits (104), Expect = 2e-17 Identities = 101/133 (76%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA-- 256 ||||||| ||||||||| | ||||| ||||||||||||||| |||| |||| Sbjct 21110 GGAAGGTTCAGGTAATCTTTTGAAACTTCATCGTGCTGGGGATAGTCCATTATTATTATT 21169 Query 257 -TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| |||||| ||||||| |||||||| | ||||| | | || |||||| |||| Sbjct 21170 TTTGAACTTCAATGAGGAATTTCTAGTAAGGATGAGTCATAAACTCGTGTTGATAACGTT 21229 Query 316 CCTGCCCTTTGTA 328 ||| ||||||||| Sbjct 21230 CCTACCCTTTGTA 21242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190196480