Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq249 756 0.0 seq48 255 2e-65 seq559 181 3e-43 seq56 136 1e-29 seq260 107 6e-21 seq134 96.9 1e-17 seq441 77.0 1e-11 seq759 75.2 4e-11 >seq249 Length=88883 Score = 756 bits (838), Expect = 0.0 Identities = 494/539 (92%), Gaps = 6/539 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 87628 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 87687 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 87688 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 87747 Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185 | || || || ||||||||| ||||| ||| | |||||| ||| |||| | | |||| Sbjct 87748 AGTTCGTAAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTG 87807 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | ||||||||||||| |||| ||||||||||||||| ||||||| |||||||||| Sbjct 87808 AATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCACTT 87864 Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 || ||||| ||||| |||| |||||||| ||| ||||||||||||||||||||||||| Sbjct 87865 ATGCTACACCCTCT-AAGTTCTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 87923 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 87924 TCTTTCCCCGCTGATTATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 87983 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87984 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 88043 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 88044 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 88103 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 88104 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 88162 >seq48 Length=169221 Score = 255 bits (282), Expect = 2e-65 Identities = 197/231 (85%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 32 TCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCC 91 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 15709 TCTCCATGAGTTCCCCTTAGGACACCTGCGTTATTTTTTAACAGATGTGCCGCCCCAGCC 15768 Query 92 AAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCG-CGAAGGACCTTAACGCCA 150 |||||||||||||||||||||| |||| | ||||| | || ||| |||||||||| | Sbjct 15769 AAACTCCCCACCTGACAATGTCTTCAAACTGGATCAGTTCGTAAAAGAACCTTAACGCTA 15828 Query 151 GAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTA 210 |||| ||| | |||||| ||| |||| | | ||||| ||||||||||||| |||| |||| Sbjct 15829 GAAAGTGGACCGTGAAGTCCAATTCCACATTATTGAATAAGTAAAAAAACAATAAAGGTA 15888 Query 211 GTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCA 260 ||||||||||| ||||||| |||||||||||| ||||| ||||||| Sbjct 15889 GTGGTATTTCAAGATCGCCGAA---GCTCCCACTTATGCTACACCCTCTCA 15936 >seq559 Length=223885 Score = 181 bits (200), Expect = 3e-43 Identities = 112/120 (93%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 154902 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 154961 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 154962 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 155021 Score = 104 bits (114), Expect = 8e-20 Identities = 99/126 (79%), Gaps = 7/126 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGT------TCTCCATGAGTCCCCCTTAGGACACCT-G 59 |||||| | || |||||||||||| ||| ||||||| ||||||||||| || | Sbjct 153412 CTTTTGTTTTATTGGAGATTTCTGTCCTTGTTCTTCATGAGTTACCCTTAGGACAACTTG 153353 Query 60 CGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 ||||| |||||||||||| | ||||||||||||| | ||||||||||||| |||| Sbjct 153352 CGTTACTTTTTAACAGATGTACTTCCCCAGCCAAACTTCTCACCTGACAATGTTTTCAAA 153293 Query 120 CCGGAT 125 | |||| Sbjct 153292 CTGGAT 153287 >seq56 Length=164261 Score = 136 bits (150), Expect = 1e-29 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||||||||||||| |||||||| |||| |||||||| Sbjct 127322 CTTATGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGAACACTTGCGTTATT 127263 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||| | | ||||||||| || ||| || |||||||| |||| | ||||| Sbjct 127262 TTTTAACAGATGTGGCACACCAGCCAAATTCTCCATCTAACAATGTCTTCAAACTGGATC 127203 >seq260 Length=297833 Score = 107 bits (118), Expect = 6e-21 Identities = 107/141 (76%), Gaps = 21/141 (15%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGT--CCCCCTTAGGACACCTGCGTTA 64 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 60778 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCCCTTAGGACACCTGCGTTA 60837 Query 65 TGGTTTAACAGA------------------TGTGCCGCCCCAGCCAAACT-CCCCACCTG 105 | ||||||||| | || ||||||||||||||| |||||||| Sbjct 60838 TTTTTTAACAGATTATTATTATTATTATATTATGACGCCCCAGCCAAACTCCCCCACCTA 60897 Query 106 ACAATGTCATCAACCCGGATC 126 ||||| || | || | | ||| Sbjct 60898 ACAATATCTTTAAACTGAATC 60918 >seq134 Length=128917 Score = 96.9 bits (106), Expect = 1e-17 Identities = 81/100 (81%), Gaps = 7/100 (7%) Strand=Plus/Plus Query 26 TTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCC 85 || |||||||||||| | ||||||||||| |||||||| ||||||| || ||| Sbjct 123204 TTTTGTTCTCCATGAATTTCCCTTAGGACATCTGCGTTA-------ACAGATGGGCAGCC 123256 Query 86 CCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||||||||||||||||||||||| || |||| | |||| Sbjct 123257 CCAGCCAAACTCCCCACCTGACAACATCTTCAAACTGGAT 123296 >seq441 Length=48584 Score = 77.0 bits (84), Expect = 1e-11 Identities = 90/120 (75%), Gaps = 10/120 (8%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||| |||||| |||||||| |||||| Sbjct 8276 CTTTTGTTCTACTGGAGATTTCTGTTCTCTATGAGTTTCCCTTAGG------GCGTTAAA 8223 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC-CCCACCTGACAATGTCATCAACCCGGAT 125 ||||| | || | || | |||||| | |||| ||||||||||| |||| | |||| Sbjct 8222 TAATAACACAAGT---GTCCTAACCAAACACACCCATCTGACAATGTCTTCAAACTGGAT 8166 >seq759 Length=202158 Score = 75.2 bits (82), Expect = 4e-11 Identities = 92/127 (72%), Gaps = 8/127 (6%) Strand=Plus/Plus Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAG--- 137 ||||||||||||||||||| || |||||||||| |||| ||| || | | ||| Sbjct 180377 CCGCCCCAGCCAAACTCCCTACTTGACAATGTCTTCAAGTCGGGTCAGTTTGTAAAGATC 180436 Query 138 -----GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192 ||||||||| | ||| ||| | |||||| | | |||| | ||||| ||||| Sbjct 180437 ATTAACGCCTTAACGCTAAAAAGTGGACTGTGAAGTCAAATTCCATATTATTGAATAAGT 180496 Query 193 aaaaaaa 199 ||||||| Sbjct 180497 AAAAAAA 180503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635183075680