Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq30 379 6e-103 seq386 360 6e-97 seq410 351 3e-94 seq190 141 3e-31 seq803 105 2e-20 seq654 105 2e-20 seq126 100 9e-19 seq148 84.2 7e-14 seq151 77.0 1e-11 >seq30 Length=1050 Score = 379 bits (420), Expect = 6e-103 Identities = 269/303 (89%), Gaps = 14/303 (5%) Strand=Plus/Minus Query 211 GGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATG 270 |||||||||||||||||||||||| || | || | ||| ||||||| ||||||||||| Sbjct 1050 GGCAGAAATTTGAATGAACCATCGTCGACGTAAAGTCATACGATTCGAAAAGTTATTATG 991 Query 271 AATCACCAAGGAGC------CCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCT 324 ||||||||| | | ||| ||| |||||||||||||||||||||||| |||| Sbjct 990 AATCACCAAAAAACTGGTTGCCC--AGG---TTGGTTTTTTATCTAATAAATACAACCCT 936 Query 325 TCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 ||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 935 TCCAGAAGTCGGGTTTTTACGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAG 876 Query 384 TAA-GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 875 TAATGGTACTATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTAT 816 Query 443 AGA-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 815 AGAATTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 756 Query 502 CAG 504 ||| Sbjct 755 CAG 753 >seq386 Length=59064 Score = 360 bits (398), Expect = 6e-97 Identities = 341/432 (79%), Gaps = 15/432 (3%) Strand=Plus/Minus Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141 |||| |||||||| |||| ||| ||| |||||| ||| ||||||||| |||||||||| Sbjct 57370 TTTGTGCGCCTGCCACCTTTCTTAGATACGGTAGCTGTTACTCAGGCTCTCTCTCCGGAA 57311 Query 142 TCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAA 201 ||||| ||| || |||||||||||| | ||||||| || | ||| | |||||||| Sbjct 57310 TCGAATTCTAGTTATCCGTTACCCGTTAAAACCATGGCAGACTTTTATTTTGCCATCGAA 57251 Query 202 AGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAA 261 ||||||||||| ||||||||||| ||||||| || | || | ||| | || | || Sbjct 57250 AGTTGATAGGGTAGAAATTTGAACTAACCATCATCGACATAAAGTCATACAATCTGAAAA 57191 Query 262 GTTATTATGAATCACCAA------GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA 315 |||||||||| | ||||| || | || | ||||||||||||||| ||||| Sbjct 57190 GTTATTATGAGTTACCAAAAAATTGGTGACCAG------GTTGGTTTTTTATCTCATAAA 57137 Query 316 TACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || | ||||||| ||||||| | |||| ||||||||||| ||||||||||||||||||| Sbjct 57136 TATAACCCTTCCAGAAGTCGAGTTTTTACGCATGTATTAGTTCTAGAATTACCACGGTTA 57077 Query 375 TCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 433 |||| ||||||| |||| || |||||||| |||| ||||||| |||| |||| |||||| Sbjct 57076 TCCAAGTAGTAATGGTATAATTAAATAAACTATAATTGATTTATTGAGTCATTTGCAGTT 57017 Query 434 TCACTGTATAG-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 ||| |||||| || | ||||||||| | |||||| |||||| ||||||||||| |||| Sbjct 57016 TCATAGTATAGAATCGTTTATACTTAAAAATGCATAACTTAATTTTTGAGACAAGTATAT 56957 Query 493 GACTACTGGCAG 504 || || ||| || Sbjct 56956 GATTATTGGGAG 56945 >seq410 Length=53010 Score = 351 bits (388), Expect = 3e-94 Identities = 278/326 (85%), Gaps = 17/326 (5%) Strand=Plus/Minus Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 || ||||| ||||||||||||||||||||||||||||||||||||||||| | || | | Sbjct 37786 CCTCTATCTTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATTGTCGACGTA 37727 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA-------GGAGCCCCGAAGGGCG 295 | | ||| ||||||| |||||||||||||||||||| || ||| || | Sbjct 37726 AAGTCATACGATTCGAAAAGTTATTATGAATCACCAAAAAAAATGGTTGCCC--AG---G 37672 Query 296 TTGGTTTTTT-ATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTA 353 |||||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||| Sbjct 37671 TTGGTTTTTTAATCTAATAAATACAACCCTTCCAGAAGTCGGGTTTTTATACATGTATTA 37612 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGA 412 |||||||| |||| ||||||||||| ||||||| || | ||| |||||||| |||||||| Sbjct 37611 GCTCTAGAGTTACTACGGTTATCCAAGTAGTAATGGCATTATTAAATAAACTATAACTGA 37552 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGA-CATGCATGGC 470 | |||||||||||||||||||||| |||||| |||| ||||||||||| |||||||||| Sbjct 37551 TGTAATGAGCCATTCGCAGTTTCAAAGTATAGAATTGTTTATACTTAGACCATGCATGGC 37492 Query 471 TTAATCTTTGAGACAAGCATATGACT 496 |||||||||||||||||||||||||| Sbjct 37491 TTAATCTTTGAGACAAGCATATGACT 37466 >seq190 Length=109755 Score = 141 bits (156), Expect = 3e-31 Identities = 101/114 (89%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGC 449 || |||||||||| ||||||||||||||||| |||| | |||||||| |||||| |||| Sbjct 66939 CTTTCAAATAAACTATAACTGATTTAATGAGTCATTTGAAGTTTCACAGTATAGAATTGT 66998 Query 450 TTATACTTAGAC--ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 |||| ||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct 66999 TTATTCTTAGACATATGCATGGCTTAATTTTTGAGACAAGCGTATGACTACTGG 67052 >seq803 Length=199194 Score = 105 bits (116), Expect = 2e-20 Identities = 79/90 (88%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCA-TGG 469 |||||||||||||||| ||||||||| |||||| ||| |||||||||||| ||| ||| Sbjct 114749 ATTTAATGAGCCATTCTCAGTTTCACAATATAGAATTGTTTATACTTAGACCGGCAATGG 114690 Query 470 CTTAATCTTTGAGACAAGCATATGACTACT 499 ||||||||||||||||||| || ||| ||| Sbjct 114689 CTTAATCTTTGAGACAAGCCTAGGACCACT 114660 >seq654 Length=18326 Score = 105 bits (116), Expect = 2e-20 Identities = 93/111 (84%), Gaps = 4/111 (4%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAA-CTGATTTAATGAG-CCATTCGCAGTTTCACTGTAT-AGATTGC 449 ||||||||||| |||| || |||||||| | |||||| |||||| || ||| | |||| Sbjct 15943 ATCAAATAAACTATAAACTAATTTAATGGGACCATTCACAGTTTTACAATATGAAATTGT 16002 Query 450 TTATACTTAGACATGCATGGCTTAA-TCTTTGAGACAAGCATATGACTACT 499 ||||||||||| | |||| ||||| |||||||||||||||||||| |||| Sbjct 16003 TTATACTTAGATAGGCATACCTTAAATCTTTGAGACAAGCATATGATTACT 16053 >seq126 Length=347927 Score = 100 bits (110), Expect = 9e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141 |||| |||||||| |||| ||| ||| |||||| ||| ||||||||| |||||||||| Sbjct 101 TTTGTGCGCCTGCCACCTTTCTTAGATACGGTAGCTGTTACTCAGGCTCTCTCTCCGGAA 42 Query 142 TCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| ||| || |||||||||||| | ||||||| || Sbjct 41 TCGAATTCTAGTTATCCGTTACCCGTTAAAACCATGGCAG 2 >seq148 Length=503397 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/93 (81%), Gaps = 6/93 (6%) Strand=Plus/Plus Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA-----AGGCC 247 ||||| ||||||||||||||||||||||||||||| |||||| || | | | | Sbjct 375469 ACCATTGAAAGTTGATAGGGCAGAAATTTGAATGAGCCATCGTCGACGTAAAATCATACG 375528 Query 248 ATGCGATTCGTTAAGTTATTATGAA-TCACCAA 279 || ||||||| ||||||||||||| ||||||| Sbjct 375529 ATACGATTCGAAAAGTTATTATGAATTCACCAA 375561 >seq151 Length=122813 Score = 77.0 bits (84), Expect = 1e-11 Identities = 126/176 (72%), Gaps = 22/176 (13%) Strand=Plus/Minus Query 346 ATGTATTAGCTC-TAGAATTACCACGGTTATCCAT-----GTAGTAAGG----TACTATC 395 |||||||| ||| |||||||| || |||||||| ||||||| | || ||| Sbjct 9910 ATGTATTAACTCATAGAATTATCATAGTTATCCAATAATAGTAGTAATGGGATTATTATT 9851 Query 396 AAATAAACGATAACTGAT--TTAATGAGCCATT-CGCAGTTTCACTG----TATAGATTG 448 ||||||| |||| ||| ||||||| | ||| | |||||||| | |||| | | Sbjct 9850 AAATAAATTATAATTGAAAATTAATGAACTATTTCACAGTTTCATAGGTATTATAAAATC 9791 Query 449 CTTA----TACTTAGACATG-CATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 || |||||| ||||| ||| | ||||||||||||||||| ||| ||| ||| Sbjct 9790 ATTTATATTACTTAAACATGACATAGATTAATCTTTGAGACAAGGATAGGACAACT 9735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510384367360