Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq624 163 2e-35 seq1193 161 8e-35 seq1370 105 5e-18 >seq624 Length=13322 Score = 163 bits (180), Expect = 2e-35 Identities = 301/440 (68%), Gaps = 15/440 (3%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 |||||||| | ||||||||| | |||||| ||||| ||||| || ||||||||| | Sbjct 7803 GCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGATCCTTTGCAGCCATCTTTTGGCTC 7744 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||||||||| ||||||||||| ||||| ||| || |||||||| ||||| || ||| Sbjct 7743 AAGAAACGTGGTCTTATGCCCGGCCTGACATTCTCTAACGAGTTGATTTCACGTGATGAG 7684 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || | ||| || |||||| | | | |||| || | || |||| || | Sbjct 7683 GGTCTTCATACCGACTTTGCTTGTCTATTGTTCACACTC---CTCAAGAATAAGCCAGCA 7627 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || | |||| | || | ||||| || |||| |||||||| || ||||| Sbjct 7626 GACTCGGTTGTGCACCAAATCTTGACCGAGGCAGTTGCTATTGAACAGGAGTTCCTGACC 7567 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | || || |||| || ||||||||| || ||| | |||||||| Sbjct 7566 GAGGCGCTCCCAGTTGCACTGATTGGCATGAATGCCAATCTCATGAAGAGATATATTGAG 7507 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT----GAAGCGGATCTATAATACG-- 61851 |||||||| |||||||| || | || | || | |||| ||| || Sbjct 7506 TTTGTTGCTGACCGTCTCTTTTTGGAACTCGGGCTCCCCAAAGC------ATACGGCGTT 7453 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | || ||||||||||||||||| || || || ||| | ||||| || || ||||| || Sbjct 7452 GAGAATCCATTTGATTTCATGGAAATTATCTCTCTGCAAGGCAAAACCAACTTTTTTGAA 7393 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || ||||| ||||| Sbjct 7392 AAGCGAGTCGGCGAGTATCA 7373 Score = 122 bits (134), Expect = 7e-23 Identities = 183/257 (71%), Gaps = 5/257 (2%) Strand=Plus/Minus Query 61095 CATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGA 61154 |||||||||||| || |||||||| |||||||| | ||||| || || | || ||||| Sbjct 8368 CATGTACAAAAAAGCAGAAGCTTCTTTCTGGACTGCCGAGGAAGTAGACCTTTCAAAAGA 8309 Query 61155 CATGAATGACTGGGA---GCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGT 61210 || | ||||||||| |||| ||| || | ||||| | || ||| | ||||| Sbjct 8308 CACCATTGACTGGGAAGAGCGTCTTACTGAT-GATGAACGCTACTTTATTTCTCGTGTGT 8250 Query 61211 TGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGC 61270 |||| || || || || || || || || || ||||||||| | | || || || | | Sbjct 8249 TGGCCTTTTTCGCTGCCTCTGATGGCATTGTTAATGAGAATCTTGTTGAGCGATTTTCTC 8190 Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 | || || ||| | | || || || | |||||||||||||||||| || || || Sbjct 8189 AAGATGTTCAAATTTTCGAAGCTCGCTATTTCTACGGCTTCCAGATCATGATTGAAAACA 8130 Query 61331 TCCACTCGGAGATGTAC 61347 ||||| ||||||||| Sbjct 8129 TCCACAGTGAGATGTAC 8113 >seq1193 Length=8092 Score = 161 bits (178), Expect = 8e-35 Identities = 549/837 (66%), Gaps = 24/837 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||| | || |||| ||||| | | ||| ||||| ||||| || || Sbjct 6020 ATCCACAGTGAATTTAATGGCATCGGCAGCAGGACGCGACCTCAGATAATACATACCTGT 6079 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTG-CATAATTCGGCT 65195 |||||| || ||||| | || || ||||| | || | | |||| | || || || Sbjct 6080 CTTGAGTCCCTTGCGCCAGCCGTAAAAGTGCAT-GCTGGTCAGTTTGGCGTAGTTGATCT 6138 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||||| ||| ||||||| ||||| ||||| || | |||||| || ||||| | Sbjct 6139 CGGCCAAATGGATATTCAGTGACTGCGATTGATCAATAAATGCACCACGGTCAGCAGCGA 6198 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACA-GGCGACGTACCTCA 65314 |||||| ||| | || || ||||| || || ||||| | ||| | | || Sbjct 6199 GGTCAATAATAACCTTTTGTGAGATTTCCCATACAGTTTTGTAGATGGCTTTG-AGTTCG 6257 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 | || || || |||| | |||| ||||| | ||||||||| || ||| Sbjct 6258 CTAGGGATGCTCTGAATGCCTTGGATAGAACCGTTGGCAGAAATAATGCGGTTCTTCATG 6317 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAG-TGACGATTGATGACTT 65432 || ||| | || | ||| | |||| |||| ||| || |||||| | | Sbjct 6318 CTGTCATTCCAGAGTCCGAGCTCGGTCAGATCCTTGAG--AAGATGTTGATTGACAATCT 6375 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||| || || || || ||||| | | ||||||||| || || || ||||| | | Sbjct 6376 GGAATTCACCAGAAAGCACACGCCTGGTATAGATGTTAGATGTATACGGCTCAAAAGCCT 6435 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| |||||||| | ||||| || |||||||| ||||| || | ||| || Sbjct 6436 CATTGTTGCCCAGAATTTGCGATGTAGACGCTGTTGGCATCGGAGCAACAAGCAAACTGT 6495 Query 65553 TTCGCAATCCGTTCATTT--CAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 | || | || | |||| |||| | ||||| | ||||| || | ||| | Sbjct 6496 TACGAACACCAT--ATTTAGCAATATCCGCACGCAGGGTTTTCCAGT--CAAACTGGTCT 6551 Query 65611 -ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 || || ||||| ||||||||| | |||| | | || | ||| | || || | Sbjct 6552 GAT-----ACTTCCACATCCCACATATCGGGCTGCAAGATACCCTTGCTGACAGGCGATC 6606 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCG 65728 | | || | || ||| || || || | ||| | ||| | || | || ||| Sbjct 6607 CTTCGTAAGTTTCATACGGACCGTCTCTTTTTGAAAGCTCACACGATGCAGTA-AGAGCG 6665 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATT-AAGTTCACGTGCCTCATCGCTCTCGTA 65787 ||||||||||||| ||| || || ||| ||| || ||| | ||||| || | Sbjct 6666 GCAAAATAAATGGCCTCAAATATCTGTCTATTTAACTTCTTG-GCCTCTGGAGAGTCAAA 6724 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 ||||||| || | || ||| | ||| || || || ||||| || | ||||||||||| Sbjct 6725 AGGCATACGCAGCTTGATAAATGCGTCTGCTAGGCCCTGAACACCTAGGCCGATGGGACG 6784 Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 || |||| ||| || ||||| |||| ||||||||||||||||||| |||||| Sbjct 6785 GTGGCGCATATTTGAGCGTCTAGCCTGCTCCACAGGGTAGTAATTGATATTGATAAT 6841 Score = 102 bits (112), Expect = 6e-17 Identities = 186/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 ||||| || || | || || ||||| | ||| || |||| | || || ||||| || Sbjct 7135 GCAAGCGAGGCCAAATTACAAACAGCCACCTCATCCGGAGACGAGTATTCAACAATCTCT 7194 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 ||||| | ||| ||||| ||||| || | ||||| || || |||||||||||| Sbjct 7195 GTGCATAAATTGCTGCATTTGATGGTTCCAAGGTTCTGCTGGTTGGATTTGCGATTGCAT 7254 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||||| || || || |||||| ||| || || | || || | | Sbjct 7255 GCATCCTTGTAAAGCATGTATGGGGTACCAGTCTCACTTTGAGAATCCAAGACAGCATAC 7314 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 || || ||||||| | | ||| |||| |||| |||||||| | ||||| Sbjct 7315 CACAGCTTCTGTGCCTTGA-TGATTTTACGAGCCCGGCCTTCACGTTCGTATTTCTCGTA 7373 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTC 66276 | | || || |||||||||||| || Sbjct 7374 TAAGGCATCAAATTCTTCACCCCATACATC 7403 >seq1370 Length=7093 Score = 105 bits (116), Expect = 5e-18 Identities = 187/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 ||||| || || || || || ||||| | ||| || |||| | || || |||||||| Sbjct 6685 GCAAGCGAGGCCAGATTACAAACAGCCACCTCATCCGGAGACGAGTATTCAACAATTTCT 6626 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 ||||| | ||| ||||| ||||| || | ||||| || || |||||||||||| Sbjct 6625 GTGCATAAATTGCTGCACTTGATGGTCCCAAGGTTCTGCTGGTTGGATTTGCGATTGCAT 6566 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||||| || || || |||||| ||| || || | || || | | Sbjct 6565 GCATCCTTGTAAAGCATGTATGGGGTACCAGTCTCACTTTGAGAATCCAAGACAGCATAC 6506 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 || || | ||||| | | ||| |||| |||| |||||||| | ||||| Sbjct 6505 CACAGCTTCTGCGCCTTGA-TGATTTTACGAGCCCGGCCTTCACGTTCGTATTTCTCGTA 6447 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTC 66276 | ||||| |||||||||||| || Sbjct 6446 TATCGCATCGAATTCTTCACCCCATACATC 6417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397542038561120